BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16407 (UTR included)
(2149 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059A1C02 557 e-158
>BF01059A1C02
Length = 289
Score = 557 bits (281), Expect = e-158
Identities = 287/289 (99%)
Strand = Plus / Plus
Query: 711 cttgaacgtcacgctgcactacaacatgcttcgcaatcgtcttcagatgataaacctttc 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttgaacgtcacgctgcactacaacatgcttcgcaatcgtcttcagatgataaacctttc 60
Query: 771 gtctgcgaacaatgtggacagagttatcgctacagatccgcttacgtgaaacatagggag 830
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtctgcgaacaatgcggacagagttatcgctacagatccgcttacgtgaaacatagggag 120
Query: 831 caaaatcaccgcgccaggttgccagctgacaaactcttcacctgcgacgtttgcggaatg 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caaaatcaccgcgccaggttgccagctgacaaactcttcacctgcgacgtttgcggaatg 180
Query: 891 cagttcagatatctcaagtcgtttaaaaaacatcgccttaatcataccctagagagactt 950
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 181 cagttcagatatctcaagtcgtttaaaaaacatcgccttaatcataccctggagagactt 240
Query: 951 cacactaaaaacactgacgtaccggaaggcatcgatcaagtctcgagta 999
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cacactaaaaacactgacgtaccggaaggcatcgatcaagtctcgagta 289
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 261,855
Number of extensions: 17299
Number of successful extensions: 17299
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 17299
Number of HSP's successfully gapped: 1
Length of query: 2149
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2132
Effective length of database: 8,119,229
Effective search space: 17310196228
Effective search space used: 17310196228
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)