BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16416 (UTR included)
(2662 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B2F01 906 0.0
BF01052A1E10 254 6e-67
>BF01058B2F01
Length = 852
Score = 906 bits (457), Expect = 0.0
Identities = 465/469 (99%)
Strand = Plus / Plus
Query: 879 aaaacaaatgaacattctctccaacaactgagtgctttgttggaagcacagcaatctaat 938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aaaacaaatgaacattctctccaacaactgagtgctttgttggaagcacagcaatctaat 419
Query: 939 cgtaatatgacaatgtcaacactaccattttatttacgtcaaaaggatatgccagaaggt 998
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 cgtaatatgacaatgtcaacactaccattttatttacgtcaaaaggatatgccagaaggt 479
Query: 999 aacttcaaattagttaacattaatcttaatagtaaaaatgtgagagaaactgtagtgaag 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 aacttcaaattagttaacattaatcttaatagtaaaaatgtgagagaaactgtagtgaag 539
Query: 1059 atcttaaatgcttgtgatatatcaactaactatgtagacaaaataccaaggagcgcaccc 1118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atcttaaatgcttgtgatatatcaactaactatgtagacaaaataccaaggagcgcaccc 599
Query: 1119 aaatctatcaacagggatatagatttcacaaaggcttataaagaatatgatacggaattt 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaatctatcaacagggatatagatttcacaaaggcttataaagaatatgatacggaattt 659
Query: 1179 gaaaaaactgtacgaatgaaaagaaaagtggaggaaaagaaagctataactaacataatt 1238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gaaaaaactgtacgaatgaaaagaaaagtggaggaaaagaaagctataactaacataatt 719
Query: 1239 gactggatatctgataatagtctacatggcagagaaaagtatgaactgacgagtgcaaca 1298
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 720 gactggatatctgataatagtctacatggcagngaaaagtatgaactgacgagtnnnaca 779
Query: 1299 cgcgagcaagtgaagtctcttataaatgagctctgcaatatttatggta 1347
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 cgcgagcaagtgaagtctcttataaatgagctctgcaatatttatggta 828
Score = 242 bits (122), Expect = 2e-63
Identities = 122/122 (100%)
Strand = Plus / Plus
Query: 758 atgtggtcgtcttataggaattataagtagaaatttaagttctgctgaaatatctactgc 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atgtggtcgtcttataggaattataagtagaaatttaagttctgctgaaatatctactgc 147
Query: 818 tctaagacccttctactttagtgttcaccctgatctttttgggaagtacccagaacaaag 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tctaagacccttctactttagtgttcaccctgatctttttgggaagtacccagaacaaag 207
Query: 878 aa 879
||
Sbjct: 208 aa 209
>BF01052A1E10
Length = 740
Score = 254 bits (128), Expect = 6e-67
Identities = 131/132 (99%)
Strand = Plus / Plus
Query: 1799 tgaagcgggtccattgatggtgtcccccactggtcagttcatcacgccatcatcgtgccc 1858
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 tgaagcgggtccattgatggtgtcccccactggtcagttcatcaccccatcatcgtgccc 444
Query: 1859 agctgatgaactcataacattcatcactcatcatttagatgaagccactttgttacttac 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctgatgaactcataacattcatcactcatcatttagatgaagccactttgttacttac 504
Query: 1919 tgaatatagcat 1930
||||||||||||
Sbjct: 505 tgaatatagcat 516
Score = 224 bits (113), Expect = 6e-58
Identities = 131/136 (96%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 1664 caaagtatcagcagcccaatactgcagtcatctacg-tcaattgatcacatctattgggg 1722
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 1 caaagtatcagcagcccaatactgcagtcatctacnntcaattaatcacatctattgggg 60
Query: 1723 atttctatggaagtggcaagaaatttccggaatctgtgccagaatcactcagcaaatatg 1782
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 atttctatggaagtggcaagaaatttccggaatctgtgccggaatcactcagcaaatatg 120
Query: 1783 agatagtagtagagcc 1798
| ||||||||||||||
Sbjct: 121 aaatagtagtagagcc 136
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,532
Number of extensions: 8136
Number of successful extensions: 8136
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8135
Number of HSP's successfully gapped: 4
Length of query: 2662
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2645
Effective length of database: 8,119,229
Effective search space: 21475360705
Effective search space used: 21475360705
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)