BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16419 (UTR included)
(2305 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051A1A09 950 0.0
>BF01051A1A09
Length = 738
Score = 950 bits (479), Expect = 0.0
Identities = 482/483 (99%)
Strand = Plus / Plus
Query: 681 cgtgggtcgaggagaattatgcgtggggcgtgcgcgtgcgcggtggtgtgcgcgttggtg 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 cgtgggtcgaggagaattatgcgtggggcgtgcgcgtgcgcggtggtgtgcgcgttggtg 315
Query: 741 gcgttgtgcgcggctgcggggctggacgaagggacccgcgccgccgccgagaggcagctg 800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcgttgtgcgcggctgcggggctggacgaagggacccgcgccgccgccgagaggcagctg 375
Query: 801 ctggcactcctggggctgccccgtaggccgccgcacacacaccgccctccgccgcccgtg 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctggcactcctggggctgccccgtaggccgccgcacacacaccgccctccgccgcccgtg 435
Query: 861 cctcaagccatgcgactcctatacgacgagagcgccatcccagcggcagccgccaacacg 920
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cctcgagccatgcgactcctatacgacgagagcgccatcccagcggcagccgccaacacg 495
Query: 921 gctcgctctttctaccacactcccaccgagctggacgatcgcttccctggcgagcaccgg 980
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gctcgctctttctaccacactcccaccgagctggacgatcgcttccctggcgagcaccgg 555
Query: 981 ttccgactatactttaacataagtggcgtgccggctgatgagatagcgaggggtgcggac 1040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttccgactatactttaacataagtggcgtgccggctgatgagatagcgaggggtgcggac 615
Query: 1041 ctcacgttccagagggctgttggaacgaccggcaatcagagactgttattatacgacgtc 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ctcacgttccagagggctgttggaacgaccggcaatcagagactgttattatacgacgtc 675
Query: 1101 gttagaccgggacgtaagggtaagagcgagcccatactgaggttactagattcgatacca 1160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gttagaccgggacgtaagggtaagagcgagcccatactgaggttactagattcgatacca 735
Query: 1161 ctc 1163
|||
Sbjct: 736 ctc 738
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 325,008
Number of extensions: 12498
Number of successful extensions: 12498
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12498
Number of HSP's successfully gapped: 1
Length of query: 2305
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2288
Effective length of database: 8,119,229
Effective search space: 18576795952
Effective search space used: 18576795952
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)