BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16420 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012B1C12 1172 0.0
>BF01012B1C12
Length = 624
Score = 1172 bits (591), Expect = 0.0
Identities = 597/599 (99%)
Strand = Plus / Plus
Query: 497 caagatgaagcaaatcgttgctaatcaaaaagtgaaaatccctgaggggttgactgttca 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagatgaagcaaatcgttgctaatcaaaaagtgaaaatccctgaggggttgactgttca 60
Query: 557 tgtgaaatctcgtctagtgacagtgaaaggtccccgaggtgttttaaaaaggaatttcaa 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtgaaatctcgtctagtgacagtgaaaggtccccgaggtgttttaaaaaggaatttcaa 120
Query: 617 acacttggcagttgacattcgcatggtgaaccctcggttattgaaggttgagaaatggtt 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acacttggcagttgacattcgcatggtgaaccctcggttattgaaggttgagaaatggtt 180
Query: 677 tggttccaagaaagagctcgccgcagtaagaactgtatgctctcatgttgacaacatgat 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggttccaagaaagagctcgccgcagtaagaactgtatgctctcatgttgacaacatgat 240
Query: 737 caagggtgtgacaaagggtttccaatacaaaatgcgtgctgtatatgcccatttccccat 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caagggtgtgacaaagggtttccaatacaaaatgcgtgctgtatatgcccatttccccat 300
Query: 797 caactgtgtcacaacggaaggtaactctgtaattgagatccgtaatttcttgggagagaa 856
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caactgtgtcacaacggaaggcaactctgtaattgagatccgtaatttcttgggagagaa 360
Query: 857 atacatcaggagggtaaagatggcaccaggggtaactgttgtcaactccacaaaacaaaa 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atacatcaggagggtaaagatggcaccaggggtaactgttgtcaactccacaaaacaaaa 420
Query: 917 ggacgagctgatcattgaaggcaattctattgaagatgtctccagctcggccgcccttat 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggacgagctgatcattgaaggcaattctattgaagatgtctccagctcggccgcccttat 480
Query: 977 acaacaatccacgactgtcaaaaacaaggatatcagaaagttcttggacggtctctatgt 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acaacaatccacgactgtcaaaaacaaggatatcagaaagttcttggacggtctctatgt 540
Query: 1037 gtctgagaaaactactgtagtaccagacgaaatataaggacattaaacttgtaagctga 1095
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 541 gtctgagaaaactactgtagtaccggacgaaatataaggacattaaacttgtaagctga 599
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 243,448
Number of extensions: 5696
Number of successful extensions: 5696
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5696
Number of HSP's successfully gapped: 1
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)