BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16438 (UTR included)
(3367 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1C03 1417 0.0
>BF01023B1C03
Length = 787
Score = 1417 bits (715), Expect = 0.0
Identities = 730/735 (99%)
Strand = Plus / Plus
Query: 1994 ctaccacaactccacccacgccgctgatgtcttacaggcggtggcgttcttcctggagaa 2053
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 ctaccacaactccacccacgccgctgatgtcttacaggcggtggcgttcttcctggagaa 112
Query: 2054 ggatcgtctgaagtcagtgctggaaccgctggaggcggcggctgctttgatatccgctgc 2113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ggatcgtctgaagtcagtgctggaaccgctggaggcggcggctgctttgatatccgctgc 172
Query: 2114 cgctcatgacatagaccaccccgggacctcttcagcgttcctctgcaactcgcgacactc 2173
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 173 cgctcatgacatagaccatcccgggacctcttcagcgttcctctgcaactcgcggcactc 232
Query: 2174 cctcgccatactctataacgacgtctgtgtgttggagtcacatcacgccgcgctcacgtt 2233
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 233 cctcgccatactctataacgacgtctgtgtgttggaatcacatcacgccgcgctcacgtt 292
Query: 2234 caaactcactctcaacgacgaccgcgtcaacatatttaagaacctggatcgcgacacgta 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caaactcactctcaacgacgaccgcgtcaacatatttaagaacctggatcgcgacacgta 352
Query: 2294 caagaacgtccgccacaacgtcatcgacatgatcctcgccactgagatgaccaaacactt 2353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 caagaacgtccgccacaacgtcatcgacatgatcctcgccactgagatgaccaaacactt 412
Query: 2354 cgagcacctcgccaagttcgtgaacgtgttctacgccaggagcagcggcagcaaggagga 2413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cgagcacctcgccaagttcgtgaacgtgttctacgccaggagcagcggcagcaaggagga 472
Query: 2414 cggcatgcagactgatgaaccactgtctttggacacaacggccctgacttcgccagaaaa 2473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cggcatgcagactgatgaaccactgtctttggacacaacggccctgacttcgccagaaaa 532
Query: 2474 cgtcgtccttataaagagaatgatgatcaaatgtgctgacgtttccaacgcatcgagacc 2533
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 533 cgtcgtccttataaagagaatgatgatcaaatgtgctgacgtctccaacgcatcgagacc 592
Query: 2534 acagaaattcgccttcgaatgggccaggagaatcgctgaagagtatttcctccaaacgga 2593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 acagaaattcgccttcgaatgggccaggagaatcgctgaagagtatttcctccaaacgga 652
Query: 2594 tgaggagaaggccaaggacctgccggtggtgatgccgatgttcgaccgcgccacctgctc 2653
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tgaggagaaggccaaggacctaccggtggtgatgccgatgttcgaccgcgccacctgctc 712
Query: 2654 catacctcgctcacagatcgggttcattgactacatcatcatcgacatgatggaggcctg 2713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 catacctcgctcacagatcgggttcattgactacatcatcatcgacatgatggaggcctg 772
Query: 2714 ggccgctttcatcga 2728
|||||||||||||||
Sbjct: 773 ggccgctttcatcga 787
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,496
Number of extensions: 4814
Number of successful extensions: 4814
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4812
Number of HSP's successfully gapped: 1
Length of query: 3367
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3349
Effective length of database: 8,109,745
Effective search space: 27159536005
Effective search space used: 27159536005
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)