BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16445 (UTR included)
(2134 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A1E10 500 e-141
BF01016A2G08 109 2e-23
>BF01022A1E10
Length = 264
Score = 500 bits (252), Expect = e-141
Identities = 261/264 (98%)
Strand = Plus / Plus
Query: 1356 ccatctctaggtgtggagcatcaggtgttgtctcagagcaccccagtaccgtccgcggtg 1415
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ccatctctaggtgtggagcatcaggtgttgtctcagagtaccccagtaccgtccgcggtg 60
Query: 1416 gtgacagcagcccgcgccgccacgcaaggctaccaacatgaacagactggcttcagtgta 1475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgacagcagcccgcgccgccacgcaaggctaccaacatgaacagactggcttcagtgta 120
Query: 1476 accgttggatccattatggctgctaacttgaaggtaccacatactcaatggcaggaggcc 1535
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accgttggatctattatggctgctaacttgaaggtaccacatactcaatggcaggaggcc 180
Query: 1536 gctactggtgtgtctcggagggagattctgttattggctgctaaatcactagctggttca 1595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctactggtgtgtctcggagggagattctgttattggctgctaaatcactagctggttca 240
Query: 1596 tacaagaagttactagcggtatcg 1619
||||||||||||||||| ||||||
Sbjct: 241 tacaagaagttactagcagtatcg 264
>BF01016A2G08
Length = 743
Score = 109 bits (55), Expect = 2e-23
Identities = 55/55 (100%)
Strand = Plus / Minus
Query: 2080 atgccaacaagtgacacttgtgatcacttgtgaccatagaggacctggttgttat 2134
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 atgccaacaagtgacacttgtgatcacttgtgaccatagaggacctggttgttat 689
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,579
Number of extensions: 16958
Number of successful extensions: 16958
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 16958
Number of HSP's successfully gapped: 2
Length of query: 2134
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2117
Effective length of database: 8,119,229
Effective search space: 17188407793
Effective search space used: 17188407793
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)