BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16457 (UTR included)
(980 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 84 5e-16
BF01058B2C06 70 7e-12
BF01011A1H06 68 3e-11
>BF14_729_C2
Length = 1289
Score = 83.8 bits (42), Expect = 5e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 15 cgtcgggagtatgtagttttaaaaaaaattaaagcacgcgtagtatatccgaaaaacatt 74
|||||||||||||||||||| || |||| ||||||||||||||| |||||||| || |
Sbjct: 570 cgtcgggagtatgtagtttttaacaaaaataaagcacgcgtagtttatccgaataattct 629
Query: 75 agtttcatttaaat 88
||||||||||||||
Sbjct: 630 agtttcatttaaat 643
Score = 71.9 bits (36), Expect = 2e-12
Identities = 54/60 (90%)
Strand = Plus / Minus
Query: 26 tgtagttttaaaaaaaattaaagcacgcgtagtatatccgaaaaacattagtttcattta 85
||||||||| || |||| |||||||||||||||||||||||| | ||||||||||||||
Sbjct: 518 tgtagtttttaagaaaaataaagcacgcgtagtatatccgaatactattagtttcattta 459
>BF01058B2C06
Length = 772
Score = 69.9 bits (35), Expect = 7e-12
Identities = 64/71 (90%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 15 cgtcgggagtatgtagttttaaaaaaaattaaagcacgcgtagtatatccgaaaaacatt 74
|||||||| ||||||||||||| ||||| |||||||||||||||| ||| | |||| |||
Sbjct: 440 cgtcgggaatatgtagttttaacaaaaaataaagcacgcgtagta-atcag-aaaatatt 383
Query: 75 agtttcattta 85
|||||||||||
Sbjct: 382 agtttcattta 372
>BF01011A1H06
Length = 739
Score = 67.9 bits (34), Expect = 3e-11
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 15 cgtcgggagtatgtagttttaaaaaaaattaaagcacgcgtagtatatccgaaaaacatt 74
||||||||||||||||| || | |||| |||| |||||||||| ||||||||||| | |
Sbjct: 502 cgtcgggagtatgtagtcttttacaaaaataaatcacgcgtagtttatccgaaaaatact 561
Query: 75 agtttcatttaaat 88
|| |||||||||||
Sbjct: 562 agattcatttaaat 575
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 142,192
Number of extensions: 3629
Number of successful extensions: 3629
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3628
Number of HSP's successfully gapped: 4
Length of query: 980
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 963
Effective length of database: 8,119,229
Effective search space: 7818817527
Effective search space used: 7818817527
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)