BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16460 (UTR included)
(2188 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 107 7e-23
BF01056B2D01 103 1e-21
BF14_335_C4 98 7e-20
BF14_335_C2 96 3e-19
BF01049B1F01 92 4e-18
BF01014B2F02 90 2e-17
BF01016B1E06 84 1e-15
BF14_335_C5 84 1e-15
BF01017A1F03 82 4e-15
BF01021A2B11 80 2e-14
BF01048A1E04 78 7e-14
BF01044A1D01 70 2e-11
BF01027B1C05 70 2e-11
>BF01019A1H08
Length = 504
Score = 107 bits (54), Expect = 7e-23
Identities = 98/112 (87%), Gaps = 8/112 (7%)
Strand = Plus / Minus
Query: 2032 cccttacacctccacctgggtc--aagccccaggcactgttgaagctcctctccctgca- 2088
|||||| |||| |||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 480 cccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaa 421
Query: 2089 -----tggacccggcacccgcacggtgaatccatggaatgctgagaggtttc 2135
||||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 420 cgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttc 369
>BF01056B2D01
Length = 728
Score = 103 bits (52), Expect = 1e-21
Identities = 78/87 (89%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 2058 cccaggcactgttgaagctcctctccctgca------tggacccggcacccgcacggtga 2111
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 164 cccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggtga 105
Query: 2112 atccatggaatgctgagaggtttcgtc 2138
|| ||||||||| ||||||||||||||
Sbjct: 104 attcatggaatgttgagaggtttcgtc 78
>BF14_335_C4
Length = 1491
Score = 97.6 bits (49), Expect = 7e-20
Identities = 140/168 (83%), Gaps = 13/168 (7%)
Strand = Plus / Plus
Query: 1983 agagaggagcttggacggtggaggtgagcgtttaacgcgtctgaga----ggacccttac 2038
||||||||||||||| || ||||||||||||||| ||| | ||| || ||||||
Sbjct: 1196 agagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggccccttaa 1255
Query: 2039 acctccacctgggtc--aagccccaggcactgttgaagctcctctccctgca------tg 2090
|||| |||||||||| ||| |||||||||||||||||||||||||| |||| ||
Sbjct: 1256 acctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc-tgcaacgcgatg 1314
Query: 2091 gacccggcacccgcacggtgaatccatggaatgctgagaggtttcgtc 2138
| ||| ||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 1315 gtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtc 1362
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 3e-19
Identities = 77/87 (88%), Gaps = 6/87 (6%)
Strand = Plus / Minus
Query: 2058 cccaggcactgttgaagctcctctccctgcat------ggacccggcacccgcacggtga 2111
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 896 cccaggcactgttgaagctcctctccctgcaacgcggcggacccggcacccgcacggtga 837
Query: 2112 atccatggaatgctgagaggtttcgtc 2138
|||||| ||| ||| ||||||||||||
Sbjct: 836 atccatagaaagctaagaggtttcgtc 810
>BF01049B1F01
Length = 840
Score = 91.7 bits (46), Expect = 4e-18
Identities = 96/111 (86%), Gaps = 5/111 (4%)
Strand = Plus / Minus
Query: 1983 agagaggagcttggacggtggaggtgagcgtttaacgcgtctgaga---ggacccttaca 2039
||||||||||||||||||| |||||| | |||||||| | | ||| || ||||||||
Sbjct: 700 agagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggccccttaca 641
Query: 2040 cctccacctgggtc--aagccccaggcactgttgaagctcctctccctgca 2088
||| |||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 640 cctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF01014B2F02
Length = 623
Score = 89.7 bits (45), Expect = 2e-17
Identities = 73/82 (89%), Gaps = 4/82 (4%)
Strand = Plus / Minus
Query: 2061 aggcactgttgaagctcctctccctgca----tggacccggcacccgcacggtgaatcca 2116
|||| ||| ||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 602 aggcgctgctgaagctcctctccctgcaacgctggacccggcacccgcacggtgcatcca 543
Query: 2117 tggaatgctgagaggtttcgtc 2138
||||||||||||||||||||
Sbjct: 542 ctgaatgctgagaggtttcgtc 521
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 1e-15
Identities = 94/109 (86%), Gaps = 3/109 (2%)
Strand = Plus / Minus
Query: 1983 agagaggagcttggacggtggaggtgagcgtttaacgcgtctgaga-ggacccttacacc 2041
||||||||| |||||||||||||||||||||||||||||| || | || |||||| |||
Sbjct: 303 agagaggagattggacggtggaggtgagcgtttaacgcgttagatagggccccttaaacc 244
Query: 2042 tccacctgggt--caagccccaggcactgttgaagctcctctccctgca 2088
| ||||||||| | | ||| ||||||||||||||||||||| |||||
Sbjct: 243 tacacctgggtcgctactccccggcactgttgaagctcctctctctgca 195
>BF14_335_C5
Length = 1597
Score = 83.8 bits (42), Expect = 1e-15
Identities = 123/150 (82%), Gaps = 10/150 (6%)
Strand = Plus / Plus
Query: 1983 agagaggagcttggacggtggaggtgagcgtttaacgcgtctgaga----ggacccttac 2038
||||||||||||||||||||||||||||||||||| ||| | ||| || |||||
Sbjct: 1444 agagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcgccttaa 1503
Query: 2039 acctccacctgggtc--aagccccaggcactgttgaagctcctctccctgc----atgga 2092
|||| ||| || ||| |||||||||||||||||||||||||| ||| ||| |
Sbjct: 1504 acctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaagatgca 1563
Query: 2093 cccggcacccgcacggtgaatccatggaat 2122
|||||||||||||||||||||||| |||||
Sbjct: 1564 cccggcacccgcacggtgaatccacggaat 1593
>BF01017A1F03
Length = 782
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 2090 ggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgtc 2138
||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 296 ggacccggcacccgcacggtgtatccatggaatgctgagaggattcgtc 344
Score = 67.9 bits (34), Expect = 6e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 1976 tagatatagagaggagcttggacggtggaggtgagcgtttaacgcg 2021
|||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 204 tagatagagagaggagcttccacggtggaggtgagcgtttaacgcg 249
>BF01021A2B11
Length = 729
Score = 79.8 bits (40), Expect = 2e-14
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 1983 agagaggagcttggacggtggaggtgagcgtttaacgcgt 2022
||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agagaggagcttggacggtggaggtgagcgtttaacgcgt 412
>BF01048A1E04
Length = 789
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 2088 atggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgtc 2138
|||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 7 atggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtc 57
>BF01044A1D01
Length = 742
Score = 69.9 bits (35), Expect = 2e-11
Identities = 41/43 (95%)
Strand = Plus / Minus
Query: 2096 ggcacccgcacggtgaatccatggaatgctgagaggtttcgtc 2138
||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 738 ggcacccgcacggtgaagccattgaatgctgagaggtttcgtc 696
>BF01027B1C05
Length = 734
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 2088 atggacccggcacccgcacggtgaatccatggaatgctgagaggtttcgtc 2138
|||||||||||||||||| || ||||||||||| |||||||| ||||||||
Sbjct: 34 atggacccggcacccgcatggcgaatccatggagtgctgagaagtttcgtc 84
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 190,802
Number of extensions: 3186
Number of successful extensions: 3186
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 3183
Number of HSP's successfully gapped: 15
Length of query: 2188
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2171
Effective length of database: 8,119,229
Effective search space: 17626846159
Effective search space used: 17626846159
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)