BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16474 (UTR included)
(1558 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01035X1E07 1300 0.0
BF01045B1F04 361 2e-99
>BF01035X1E07
Length = 703
Score = 1300 bits (656), Expect = 0.0
Identities = 683/692 (98%)
Strand = Plus / Plus
Query: 386 tgttcgtgtgaagatatgtatgtggatttattgaaaatatttcatttactgaggttgatt 445
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 10 tgttcgtgtgaagatatgtatgtggatttattgaaaatatttcatttaccgaggttgatt 69
Query: 446 caaagctaaaacttttgagatgtttgttaaatttgttgttttattgtgctgcttgatgtc 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 caaagctaaaacttttgagatgtttgttaaatttgttgttttattgtgctgcttgatgtc 129
Query: 506 agtctatggcgatgcgagagttgctgtagctaatctggtttctttgaatgctactgggag 565
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 130 agtctatggcgatgcgagagttgctgtagctaatctggtttctttgaatgccactgggag 189
Query: 566 catatatttcactgagacggatggcggtttacgagttcagggtaagataacaggtcttaa 625
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 190 catatatttcactgagacggatggcggtttgcgagttcagggcaagataacaggtcttaa 249
Query: 626 acccggattatatggattccatgtacacgaacttggagataccagcacgtgcgacgccac 685
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acccggattatatgggttccatgtacacgaacttggagataccagcacgtgcgacgccac 309
Query: 686 gggacctcactttaaccctgatggaaccaatcacggcgatagagtgcatgacgtacgaca 745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gggacctcactttaaccctgatggaaccaatcacggcgatagagtgcatgacgtacgaca 369
Query: 746 tgttggtgatttagggaatgtggagttcgtgtcaaacgttactgaaaacgttgctgtggt 805
|||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 370 tgttggtgatctagggaatgtggagttcgtgtcaaatgttactgaaaacgttgctgtggt 429
Query: 806 ggattttgtagatggacttatatcactacacggacggaacagcattttgggaagagcatt 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggattttgtagatggacttatatcactacacggacggaacagcattttgggaagagcatt 489
Query: 866 agttcttcatgaacagaaagacgatttaggtcttggtggacacaacacttctttaaccac 925
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 490 agttcttcatgaacagaaagacgatttaggtcttggtggacacaacacttccttgaccac 549
Query: 926 gggaaatgcaggggcaaggctggcgtgcagtactatcgggattcactccgggaattggaa 985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gggaaatgcaggggcaaggctggcgtgcagtactatcgggattcactccgggaattggaa 609
Query: 986 ttccgggatatccatacatccctccgtattgctgcttgtctatggattatttataattta 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttccgggatatccatacatccctccgtattgctgcttgtctatggattatttataattta 669
Query: 1046 ttttaaatattagtttttgttacctgtttgtt 1077
||||||||||||||||||||||||||||||||
Sbjct: 670 ttttaaatattagtttttgttacctgtttgtt 701
>BF01045B1F04
Length = 810
Score = 361 bits (182), Expect = 2e-99
Identities = 182/182 (100%)
Strand = Plus / Minus
Query: 24 acctctagtctataagttccagggagtagtatacgccagaattctccgtatttagttgta 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 acctctagtctataagttccagggagtagtatacgccagaattctccgtatttagttgta 402
Query: 84 tggaacgtgacctcgcgtcctttgaccttgatcgaagccttttccaccgggttaccgtgt 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tggaacgtgacctcgcgtcctttgaccttgatcgaagccttttccaccgggttaccgtgt 342
Query: 144 tcgtccatcacgaacccgtgggcgccgcggtgggcttcagctagatactttataagcgcc 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tcgtccatcacgaacccgtgggcgccgcggtgggcttcagctagatactttataagcgcc 282
Query: 204 tg 205
||
Sbjct: 281 tg 280
Score = 214 bits (108), Expect = 3e-55
Identities = 120/124 (96%)
Strand = Plus / Minus
Query: 1068 cctgtttgttgtcctgccagtatttcggtagctcatgagccaaaggatatttgcagcatg 1127
|||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 cctgtttgttatcctgccagtatttcggtagctcatgagccagtggatatttgcagcatg 224
Query: 1128 agatctctagagtaatttccatacatccatgccacaggtagttgtagtcttgcattcctc 1187
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 223 agatctctagagtaatttccatacatccatgccacaggtagttgtagtcttgcattccgc 164
Query: 1188 ctgt 1191
||||
Sbjct: 163 ctgt 160
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,836
Number of extensions: 5004
Number of successful extensions: 5004
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5004
Number of HSP's successfully gapped: 3
Length of query: 1558
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1541
Effective length of database: 8,119,229
Effective search space: 12511731889
Effective search space used: 12511731889
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)