BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16488 (UTR included)
(2059 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021A2C02 1451 0.0
>BF01021A2C02
Length = 760
Score = 1451 bits (732), Expect = 0.0
Identities = 741/744 (99%)
Strand = Plus / Plus
Query: 416 attacgaattagaaatatctttttcttcgatttatggttccttttgagtgttaagtgcta 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 attacgaattagaaatatctttttcttcgatttatggttccttttgagtgttaagtgcta 72
Query: 476 attacataacagtttagtttataatatgtccggttttaccgaaaatgcgttgattcgaaa 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 attacataacagtttagtttataatatgtccggttttaccgaaaatgcgttgattcgaaa 132
Query: 536 gttacaggaacttaattcaagtcaacaaagtatacaaacattatcactatggctaataca 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gttacaggaacttaattcaagtcaacaaagtatacaaacattatcactatggctaataca 192
Query: 596 tcaccgtaaacatcatgccgctattgttaaaacatggtataaggaacttctgaaagctaa 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcaccgtaaacatcatgccgctattgttaaaacatggtataaggaacttctgaaagctaa 252
Query: 656 agacagcaaacaagtaacgttcatgtacctagctaacgatgttatacaaaatagtaagaa 715
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agacagcaaacaagtaacgtttatgtacctagctaacgatgttatacaaaatagtaagaa 312
Query: 716 gaaaggtccggaatatggcaaagagtttggggccgtgttaatagatgcactgaagcacat 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gaaaggtccggaatatggcaaagagtttggggccgtgttaatagatgcactgaagcacat 372
Query: 776 ggcaaagactggtatcaatgcaaaaacgaaacatgcactacatagaatattaaatatatg 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcaaagactggtatcaatgcaaaaacgaaacatgcactacatagaatattaaatatatg 432
Query: 836 ggaggagaggggtgtgtatgaaccggaaagaatacaggaattcaaggttgctgttgatcc 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ggaggagaggggtgtgtatgaaccggaaagaatacaggaattcaaggttgctgttgatcc 492
Query: 896 aaatgatgctgaagttacaaatgctaaaagaaaggctgttgatatagaaacaaaagacaa 955
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 aaatgatactgaagttacgaatgctaaaagaaaggctgttgatatagaaacaaaagacaa 552
Query: 956 tgtaaaaaaatctaggcaggaggagaagacgaggcaaaaagaacataaagaaagaagaaa 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tgtaaaaaaatctaggcaggaggagaagacgaggcaaaaagaacataaagaaagaagaaa 612
Query: 1016 aagtgattctaaacttgaatcaaaggctggttctgatggacataatgacaatcattcaag 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aagtgattctaaacttgaatcaaaggctggttctgatggacataatgacaatcattcaag 672
Query: 1076 cagccctaagacaccaccaggcgatccgccggaacctgaagaacttatcaaggccctact 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cagccctaagacaccaccaggcgatccgccggaacctgaagaacttatcaaggccctact 732
Query: 1136 ggaacttgaatccagtgcttcaag 1159
||||||||||||||||||||||||
Sbjct: 733 ggaacttgaatccagtgcttcaag 756
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 321,816
Number of extensions: 20262
Number of successful extensions: 20262
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20262
Number of HSP's successfully gapped: 1
Length of query: 2059
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2042
Effective length of database: 8,119,229
Effective search space: 16579465618
Effective search space used: 16579465618
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)