BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16501 (UTR included)
(1771 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01056A1E12 1453 0.0
>BF01056A1E12
Length = 814
Score = 1453 bits (733), Expect = 0.0
Identities = 779/793 (98%), Gaps = 1/793 (0%)
Strand = Plus / Plus
Query: 980 gtcggatgattttaaaaacaacatgctccgtttgaagcgcctcgtcctcattggtggacc 1039
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtcggatcattttaaaaacaacatgctccgtttgaagcgcctcgtcctcattggtggacc 60
Query: 1040 cgatgatcaggtcatcacgccttggcagagcagccaattcggttactacgacgccaacga 1099
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgatgatcaggtcatcacgccttggcagagcagccaattcggttactacgacgccaacga 120
Query: 1100 aactataattgaaatgtacgaacaggatatatatctgtcagataaaataggtttaaagac 1159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aactataattgaaatgtacgaacaggatatatatctgtcagataaaataggtttaaagac 180
Query: 1160 gttagacagaacgaaaagactgcatctggtgactgtgccaggggtcaatcatttcaactg 1219
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 181 gttagacagaacgaaaagactgcatctggtgactgtgccaggagtcaatcatttcaactg 240
Query: 1220 gcacatgaatgtgtctatagtagatgactgtttgttaccttatctcgattaatgttcaat 1279
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcatatgaatgtgtctatagtagatgactgtttgttaccttatctcgattaatgttcaat 300
Query: 1280 ttgaaataatttttaaatactctatgaacaaaattttttgataccgcttcaaaaccattt 1339
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 ttgaaataatttttaaatactctatgaacaaaattttttgataccgcttgaaaaccattt 360
Query: 1340 taactcttatataactgattgtatgatcatgaataatataaattatgataattagtaata 1399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taactcttatataactgattgtatgatcatgaataatataaattatgataattagtaata 420
Query: 1400 aaattaagtgatctgaagtcagttcatttagatttacaatgttatttatctaaatcagtg 1459
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 421 aaattaagtgatctgaagtcagttcatttagatttacaatgttatttatctaaatcggtg 480
Query: 1460 ccaaggaggttataatagtcaagtagtactaagtataactagttttaacatgtattgtga 1519
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccaaggcggttataatagtcaagtagtactaagtataactagttttaacatgtattgtga 540
Query: 1520 ttgttacataattcagcagcagctcagaaaaatatattcttaatgaatttggcatttata 1579
|||||| |||||||| |||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 541 ttgttaaataattcaccagcagctcataaaaatatattcttagtgaatttggcatttata 600
Query: 1580 gagaataagtcatccctgaataacaagtctgcttataactctactgcttatattaaaata 1639
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 gagaataagtcatccctgaataacaagtctgcttataactctactacttatattaaaata 660
Query: 1640 cttattattgcaataaattaatccatatcaatacttagcgggaactatcaat-aaaaaaa 1698
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 661 cttattattgcaataaattaatccatatcaatacttagtgggaactatcaataaaaaaaa 720
Query: 1699 atgtgaaaattatcatgtatggtaattgtatattttaaacggaatgatataaaattcaaa 1758
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgtgaaaattataatgtatggtaattgtatattttaaacggaatgatataaaattcaaa 780
Query: 1759 tgctgtgacgtag 1771
|||||||||||||
Sbjct: 781 tgctgtgacgtag 793
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,833
Number of extensions: 7227
Number of successful extensions: 7227
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7226
Number of HSP's successfully gapped: 1
Length of query: 1771
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1754
Effective length of database: 8,119,229
Effective search space: 14241127666
Effective search space used: 14241127666
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)