BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16511 (UTR included)
(5299 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01053B2B07 1580 0.0
BF01031A2C02 565 e-160
>BF01053B2B07
Length = 832
Score = 1580 bits (797), Expect = 0.0
Identities = 823/832 (98%)
Strand = Plus / Plus
Query: 1287 tcgagatcagccaaaaaactcagtcctgataagaagggacggcaggagtctatggataaa 1346
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcgagatcatccaaaaaactcagtcctgataagaagggacggcaggagtctatggataaa 60
Query: 1347 tttgttaagaaaactgatggtaaatcaaaaacccccattgaccctgaagccagaaaagta 1406
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61 tttgttaagaaaactgatggtaaatcaaaaacccccattgaccctgaagctagaaaagta 120
Query: 1407 gcccaagaaatggctgacaaaatgaggaaagcggaggacttattgaggcaacataaagaa 1466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcccaagaaatggctgacaaaatgaggaaagcggaggacttattgaggcaacataaagaa 180
Query: 1467 gaagagaaagcgagaaagaaagagaaaaatgccagactcatggcatttatgaaggaatgg 1526
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaagagaaagcgaggaagaaagagaaaaatgccagactcatggcatttatgaaggaatgg 240
Query: 1527 cataaggttaaagaagaccaggagctagaagatcacaagattataccaaagggcactccg 1586
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cataaggttaaagaagaccaggagctagaagatcacaagattataccaaagggcactcca 300
Query: 1587 gtagagatagaaggaataccacataaaaattttggtgacttcctctcagtgttagaattt 1646
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtagagatagaaggaattccacataaaaattttggtgacttcctctcagtgttagaattt 360
Query: 1647 gttcacaatttctcagaactactcaaactcaaagacgtgtttcacaccgagtttgacctt 1706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttcacaatttctcagaactactcaaactcaaagacgtgtttcacaccgagtttgacctt 420
Query: 1707 gaaacatttcggaaatcattgacctctaaagaacacgcgtggatattcagcgagttggta 1766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaacatttcggaaatcattgacctctaaagaacacgcgtggatattcagcgagttggta 480
Query: 1767 cagatgctactatcagcaatattctctttgcaagaagatgaggcagaagaatataatgag 1826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagatgctactatcagcaatattctctttgcaagaagatgaggcagaagaatataatgag 540
Query: 1827 ggcaaaggaattcaggaatcagtagaggagcctccggccatctcgacaggtatcgcgcgc 1886
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggcaaaggaattcaggaatctgtagaggagcctccggccatctcgacaggtatcgcgcgc 600
Query: 1887 gccatagagcaagcgacgcgagccggaaagtgggcgcacacctacctcgggacaccactc 1946
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 gccatagagcaagcgacgcgagccgggaagtgggcgcacacctacctcgggacaccactc 660
Query: 1947 agcaagctgcccctggaccccaccactgtgtctgaagtgctgaggttgcacctgctgtcg 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agcaagctgcccctggaccccaccactgtgtctgaagtgctgaggttgcacctgctgtcg 720
Query: 2007 tcgggtggcgtggctggttcccgctgcctggcgtggcggctgcaccagcgcggtgggtac 2066
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tcgggcggcgtggctggttcccgctgcctggcgtggcggctgcaccagcgcggtgggtac 780
Query: 2067 tccagcgccgatgacccagcactgcgcctgcgcacgtcacgtccacatactt 2118
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 781 tccagcgccgatgacncagcactgcgcctgcgcacgtcacgtccacatactt 832
>BF01031A2C02
Length = 757
Score = 565 bits (285), Expect = e-160
Identities = 300/305 (98%)
Strand = Plus / Plus
Query: 4995 ggatcagtgactacattcatgatggctggacggtgaacatgattacattccacttatacc 5054
|||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggatcactgtctacattcatgatggctggacggtgaacatgattacattccacttatacc 60
Query: 5055 atctttaaacacctattctttcaaaaaaatagagaattgaattgtacactcggggtgatc 5114
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctttaaacacctattctttaaaaaaaatagagaattgaattgtacactcggggtgatc 120
Query: 5115 atgaatgtagttaattgattgtgcttaacatactctgtgagttcgtgctttaatctagta 5174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgaatgtagttaattgattgtgcttaacatactctgtgagttcgtgctttaatctagta 180
Query: 5175 ccatagataaaatagttgtagtgatgtgatctatgtaactataccatagagaatgtataa 5234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccatagataaaatagttgtagtgatgtgatctatgtaactataccatagagaatgtataa 240
Query: 5235 tctccataaagatagatttaggctaaggtagtttttggatgtcggtggctatggccatgt 5294
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 241 tctccataaagatagatttaggctaaggtagtctttggatatcggtggctatggccatgt 300
Query: 5295 ttatt 5299
|||||
Sbjct: 301 ttatt 305
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 439,140
Number of extensions: 7256
Number of successful extensions: 7256
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7256
Number of HSP's successfully gapped: 2
Length of query: 5299
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5281
Effective length of database: 8,109,745
Effective search space: 42827563345
Effective search space used: 42827563345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)