BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16514 (UTR included)
(1615 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_152_C1 1683 0.0
>BF14_152_C1
Length = 930
Score = 1683 bits (849), Expect = 0.0
Identities = 908/930 (97%), Gaps = 1/930 (0%)
Strand = Plus / Plus
Query: 298 gaatttatctatcagtatagagtttacttttgatctatcttgtaccgttcgagtgtttaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatttatctatcagtatagagtttacttttgatctatcttgtaccgttcgagtgtttaa 60
Query: 358 aaagtgggtaccgctttattaaatttacactgataaatattatctaatcgaacatgataa 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaagtgggtaccgctttattaaatttacactgataaatattatctaatcgaacatgataa 120
Query: 418 taattttgaagtaaattttt-tataggatttaaatcgaatcgccggtcttggttagcgtc 476
|||||||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||
Sbjct: 121 taattttgaagtaaatgtttatatggtatttaaatcgaatcgccggtcttggttagcgtc 180
Query: 477 ttatgagttcttttattaacagaaatgaataagatcgtggtattcggctccaccggcatg 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttatgagttcttttattaacagaaatgaataagatcgtggtattcggctccaccggcatg 240
Query: 537 actggccgcagcgtcgtggaagcggctttgaagcaagggttacaagtgcgtgcctttgtc 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 actggccgcagcgtcgtggaagcggctttgaagcaagggttacaagtgcgtgcctttgtc 300
Query: 597 cgtgatcccaccaagttgccggaggagttaaagtctcaagtggaggtcttcaagggggat 656
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cgtgatccgaccaagttgccggaggagttaaagtctcaagtggaggtcttcaagggggat 360
Query: 657 gttttagaaccggattccgttgtgaatgcggtcgaaggtatggatggagtggtcatagct 716
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 361 gttttagaaccggattccgttgtgaatgcggttgaaggtatggatggagtggtcatagct 420
Query: 717 ctcggcacaaacggaaatttggatccgacttctgatttgtcggagggaacgaaaatcatt 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ctcggcacaaacggaaatttggatccgacttctgatttgtcggagggaacgaaaatcatt 480
Query: 777 atagatgctatgagaatgaagcacgtcaagaatgtctcagcatgcgtgtcggcgttcctg 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atagatgctatgagaatgaagcacgtcaagaatgtctcagcatgcgtgtcggcgttcctg 540
Query: 837 ttctatgagccagaaaaggtgccaccaagattccatgctatcaccaaagatcacaggagg 896
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 541 ttctatgagccagaaaaggtgccacctagattccatgctatcaccaaagaccacaggagg 600
Query: 897 atgtttgaggcgttgagagacagcggtctgaactgggttaccgtcttcccgccacatata 956
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 601 atgtttgaggcgttgagagacagcggactgaactgggttaccgtcttcccgccacatata 660
Query: 957 tctgatgatccaagccgagatattatagtagaaatcaatccggagaagtcaccgggtcgt 1016
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctgatgatccaagccgagatattatagtagaaatcaatccggagaagtcaccgggtcgt 720
Query: 1017 tgcatttcaaagtacgaccttggtaagctgttagtagacgctctgtcacaggagaaatac 1076
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgcatttcaaagtacgaccttggtaagctgttagtagacgctctgtcacaggagaaatac 780
Query: 1077 tacaaaagtatactaggcgtgtgcaacgtacctcagtgaattgtgtatctgtggcgagta 1136
||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 781 tacnnnagtatactcggcgtgtgcaacgtacctcagtgaattgtgtttctgtggcgagta 840
Query: 1137 tatgatatggcgggaaagtgatatgacaattacataggaaaaagtatagctgttaatgat 1196
||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 841 tatgatatggcgggaaagtgatatgacaattacatnnnnnnnngtatagctgttaatgat 900
Query: 1197 gttatttaaattattataatgttattacat 1226
||||||||||||||||||||||||||||||
Sbjct: 901 gttatttaaattattataatgttattacat 930
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 207,886
Number of extensions: 4257
Number of successful extensions: 4257
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4255
Number of HSP's successfully gapped: 1
Length of query: 1615
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1598
Effective length of database: 8,119,229
Effective search space: 12974527942
Effective search space used: 12974527942
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)