BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16548 (UTR included)
(2236 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2115_C1 2476 0.0
BF01052B2H04 107 8e-23
BF01057B1C11 88 7e-17
BF01054B2B08 78 7e-14
BF01059B2F03 70 2e-11
>BF14_2115_C1
Length = 1360
Score = 2476 bits (1249), Expect = 0.0
Identities = 1295/1312 (98%)
Strand = Plus / Plus
Query: 609 ccaaaaacaagagtaaaaatgaattgcccatttaatgaagagcagttaactcaactaaag 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 ccaaaaacaagagtaaaaatgaattgcccatttaatgaagagcagttaactcaactaaag 108
Query: 669 gccttcgtagagctttgcaagaatcaacctatgatactgcatcatcctaaattatctttc 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gccttcgtagagctttgcaagaatcaacctatgatactgcatcatcctaaattatctttc 168
Query: 729 ttcaaagattatttggtttcactcggcgttacactccccaccgctacttataataccaaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ttcaaagattatttggtttcactcggcgttacactccccaccgctacttataataccaaa 228
Query: 789 aattttaccgcttccggcgatagtaatgctggtgctaaagttgaagaggaagttcccgca 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aattttaccgcttccggcgatagtaatgctggtgctaaagttgaagaggaagttcccgca 288
Query: 849 gaagaagaggaggaggatattgaatctgatgtagaacttgatatggaaggagtaataacc 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gaagaagaggaggaggatattgaatctgatgtagaacttgatatggaaggagtaataacc 348
Query: 909 gacacaactccggctgatcaggaaatgggtgatgatacaaaggaagtgtcagatgaggat 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gacacaactccggctgatcaggaaatgggtgatgatacaaaggaagtgtcagatgaggat 408
Query: 969 cgggatctgtctgatgaaaagaggtcagaagccatgcgtgccttctcagaacagaaatat 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 cgggatctgtctgatgaaaagaggtcagaagccatgcgtgccttctcagaacagaaatat 468
Query: 1029 gatgaagctattcagatatacactgaggcgattaaacttaaccctcaaagtgcacttctt 1088
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 469 gatgaagctattcagatatacactgaggcgattaaacttaaccctcaaagtgcactcctc 528
Query: 1089 ttcgccaaaaggggtcaggtctttctcaagcagaacaggttgcatgcctgtatcaaggac 1148
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 529 ttcgccaaaaggggtcaggttttcctcaagcagaacaggttgcatgcctgtatcaaggac 588
Query: 1149 tgctcacgagccctagaactgaactgtgatagcgtagctggatacaaattccgtggccgc 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgctcacgagccctagaactgaactgtgatagcgtagctggatacaaattccgtggccgc 648
Query: 1209 gcttacaggctgcttggaaagttcgaggaggccgctcatgatctgtgcgagtcactcaaa 1268
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 649 gcttacaggctgcttggaaagttcgaggaagccgctcatgatctgtgcgagtcactcaaa 708
Query: 1269 attgattacgacgaccaaacaaacgaatggctgaatgaggttaagccaaacgctgataaa 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 attgattacgacgaccaaacaaacgaatggctgaatgaggttaagccaaacgctgataaa 768
Query: 1329 atacgccagcataatattaatgtgcaacgtcataaggaagaaaaggagcgtcgcgagaaa 1388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atacgccagcataatattaatgtgcaacgtcataaggaagaaaaggagcgtcgcgagaaa 828
Query: 1389 ttaaaccgagctcgcaaagcgcaaaaagcaaacgctgaagctgctgaggaacaagcgttt 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ttaaaccgagctcgcaaagcgcaaaaagcaaacgctgaagctgctgaggaacaagcgttt 888
Query: 1449 acacaaggacttcctaagttcatgggtaaaatagatcttgaacagcttctaaaggatccg 1508
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 acacaaggacttcctaagttcatgggtaaaatagatcttgaacagcttctaaaggatcca 948
Query: 1509 gaattgttggctgcctctcaggatcttgagatattaatggctctgcaagacatttcatcg 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 gaattgttggctgcctctcaggatcttgagatattaatggctctgcaagacatttcatcg 1008
Query: 1569 aatccaatcaactttttgaagtatcagaacaatcctaaaattgctgctgcgttggaactg 1628
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1009 aatccaatcaactttttgaagtatcagaacaatcctaaaattgctgctgcattggaactg 1068
Query: 1629 tttgcaaggaaatacaagtgtgaatctggtgctgctccggaaccacaggcagatacaaaa 1688
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1069 tttgcaaggaaatacaagtgtgaacctggtgctgctccggaaccacaggcagatacaaaa 1128
Query: 1689 ccgaagccagcaaccaagacgcccgatgacgatgtaggcctggattaaaaactattcaca 1748
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1129 ccgaagccagcaaccaagacgcccgatgacgatgtaggcctggattaaaatctattcaca 1188
Query: 1749 taccatactattaataactattgagaatatcttcatacacattaaaatttgagttattgt 1808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1189 taccatactattaataactattgagaatatcttcatacacattaaaatttgagttattgt 1248
Query: 1809 gtcgcaaaaattataaaatgcagattagtttcattattaaaaattcaaattgctgttcat 1868
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1249 gtcgcnnnatttataaaatgcagattagtttcattattaaaaattcaaattgctgttcat 1308
Query: 1869 aaaatgcttccaaatcatatcgtagtctgcaatacttccgcccacctctgcc 1920
|||| ||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 1309 aaaaagcttccaaatcatgtcgtnntctgcaatacttccgcccacctctgcc 1360
>BF01052B2H04
Length = 668
Score = 107 bits (54), Expect = 8e-23
Identities = 140/165 (84%), Gaps = 4/165 (2%)
Strand = Plus / Minus
Query: 446 ttcgtccgatgagcaagagagccgtttgccctttccctattc--actttgtcctgtcatg 503
||||||||||||| ||||| ||| ||||||||||||||||| || || ||||| |||
Sbjct: 360 ttcgtccgatgagtcagagaaccggttgccctttccctattcccaccttttcctgacatt 301
Query: 504 tcctttttcccacctctccttattcctaaaaaaccaaagtcggcaacgcatccgcaacag 563
|||| |||||||| ||| |||||||| ||||| || | |||||||||||||||||||
Sbjct: 300 cccttattcccacccttccctattcctataaaac-aagcttggcaacgcatccgcaacag 242
Query: 564 agatgttgcggatgtccatgtgcgacggtagctactgcccaccaa 608
|| ||| |||| |||||||| |||||||||||| |||||||||||
Sbjct: 241 agttgt-gcgggtgtccatgggcgacggtagctgctgcccaccaa 198
>BF01057B1C11
Length = 848
Score = 87.7 bits (44), Expect = 7e-17
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 524 tattcctaaaaaaccaaagtcggcaacgcatccgcaacagagatgttgcggatgtccatg 583
||||||||||||||||| || |||||||||||||||||| ||||||||| || ||||||
Sbjct: 206 tattcctaaaaaaccaaggttggcaacgcatccgcaacatagatgttgcaaatttccatg 265
Query: 584 tgcgacggtagctactgcccacca 607
||||| || ||||||||| ||||
Sbjct: 266 ggcgacagtggctactgccaacca 289
>BF01054B2B08
Length = 807
Score = 77.8 bits (39), Expect = 7e-14
Identities = 111/134 (82%), Gaps = 2/134 (1%)
Strand = Plus / Plus
Query: 428 agtctgtaatggatgcgtttcgtccgatgagcaagagagccgtttgccctttccctatt- 486
||||| |||||| |||||||||| ||||||| ||||||||| ||||||||||||| ||
Sbjct: 674 agtctttaatggctgcgtttcgttcgatgagtgagagagccggttgccctttccctgttc 733
Query: 487 -cactttgtcctgtcatgtcctttttcccacctctccttattcctaaaaaaccaaagtcg 545
||| | ||||| ||| || || |||||||| |||| |||||||| |||||| || |
Sbjct: 734 ccaccctttcctgccatctctttattcccacccctcccacttcctaaacaaccaaggttg 793
Query: 546 gcaacgcatccgca 559
||||||||||||||
Sbjct: 794 gcaacgcatccgca 807
>BF01059B2F03
Length = 703
Score = 69.9 bits (35), Expect = 2e-11
Identities = 59/67 (88%)
Strand = Plus / Minus
Query: 340 gtaggtagtggagcctaaatgtagtcatgtaaccacagatcgaacatgggctagttcgat 399
|||||| || ||||||| |||||||||||||| |||||||||||||||||| | ||||
Sbjct: 133 gtaggtggtagagcctagctgtagtcatgtaactacagatcgaacatgggctggctcgag 74
Query: 400 cggggaa 406
|||||||
Sbjct: 73 cggggaa 67
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 265,743
Number of extensions: 5451
Number of successful extensions: 5451
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5448
Number of HSP's successfully gapped: 5
Length of query: 2236
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2219
Effective length of database: 8,119,229
Effective search space: 18016569151
Effective search space used: 18016569151
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)