BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16557 (UTR included)
(2185 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B2A09 1158 0.0
BF14_2115_C1 153 1e-36
>BF01015B2A09
Length = 602
Score = 1158 bits (584), Expect = 0.0
Identities = 595/600 (99%)
Strand = Plus / Plus
Query: 630 tataaggatgagttatatacgacgagaattgatatcggatttccgtctgaaaagaaaaat 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tataaggatgagttatatacgacgagaattgatatcggatttccgtctgaaaagaaaaat 60
Query: 690 tcattgtcagcccgtgaagatcgtattgctaaagttcagaaagctaaaagtgataaaaac 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcattgtcagcccgtgaagatcgtattgctaaagttcagaaagctaaaagtgataaaaac 120
Query: 750 ttagaacaactagcaagaaatttacagttggaaattaatatggagcaatcacgaaaggac 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttagaacaactagcaagaaatttacagttggaaattaatatggagcaatcacgaaaggac 180
Query: 810 tggctgcagtccttggggcccttgcataagaaacagatagcagaccactatgcaatattt 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggctgcagtccttggggcccttgcataagaaacagatagcagaccactatgcaatattt 240
Query: 870 gaacatttatatggagagggtttctttgtaccacatttagatttagaagtgttttatgat 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaacatttatatggagagggtttctttgtaccacatttagatttagaagtgttttatgat 300
Query: 930 ctaggagatggcaattgtttacctgtatattatggtaatgtggtaaaacctgccgaggct 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctaggagatggcaattgtttacctgtatattatggtaatgtggtaaaacctgccgaggct 360
Query: 990 tcacaaagtcctatagttagctacgaatctgatggcaattcactatggactcttgttttg 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcacaaagtcctatagttagctacgaatctgatggcaattcactatggactcttgttttg 420
Query: 1050 acaaatcttgatgggcatttgaaagataatgaaaaggagtatgttcattggatggtttca 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaatcttgatgggcatttgaaagataatgaaaaggagtatgttcattggatggtttca 480
Query: 1110 aatattcctggtaactgtatagagaaaggagatgtcatttttgattatttacgtcccttt 1169
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 aatattcctggtaactgtatagagaaaggagatgtcatttttgattatttatgtcccttt 540
Query: 1170 cctgtaaaaggtactggttaccatagatatgtttttgtactatacaagcaagatgtgcaa 1229
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 541 cctgtnnnaggtactggttaccatagatatgtttttgtnctatacaagcaagatgtgcaa 600
>BF14_2115_C1
Length = 1360
Score = 153 bits (77), Expect = 1e-36
Identities = 87/91 (95%)
Strand = Plus / Minus
Query: 2095 ggcagaggtgggcggaagtattgcagactacgatatgatttggaagcattttatgaacag 2154
||||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||
Sbjct: 1360 ggcagaggtgggcggaagtattgcagannacgacatgatttggaagctttttatgaacag 1301
Query: 2155 caatttgaatttttaataatgaaactaatct 2185
|||||||||||||||||||||||||||||||
Sbjct: 1300 caatttgaatttttaataatgaaactaatct 1270
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,940
Number of extensions: 7532
Number of successful extensions: 7532
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7532
Number of HSP's successfully gapped: 2
Length of query: 2185
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2168
Effective length of database: 8,119,229
Effective search space: 17602488472
Effective search space used: 17602488472
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)