BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16574 (UTR included)
(2008 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034A2A12 607 e-173
>BF01034A2A12
Length = 499
Score = 607 bits (306), Expect = e-173
Identities = 355/369 (96%), Gaps = 2/369 (0%)
Strand = Plus / Minus
Query: 1633 gatttttaagtaattttatataatatgtatatgtatatattttattgtgtagaacttttt 1692
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 496 gattttaaagtaattttatataatatgtataggtatatattttattgtgtagaacttttt 437
Query: 1693 t-agtacaaatatgaatattgattcataatgatgtcacattttt-atatgataagttttt 1750
| |||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||
Sbjct: 436 ttagtacaaatatgaatattgattcataatgangtcacattttttataggataagttttt 377
Query: 1751 ttgctttagtttttatatttatataaccattaaggacgtgttagatgtttaaatagaaaa 1810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ttgctttagtttttatatttatataaccattaaggacgtgttagatgtttaaatagaaaa 317
Query: 1811 gaattgtaaaaatccactagtctgatgcaactattgtgcataaatgattccttatatttt 1870
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 316 gaattgtaaaaatccactagtctgaagcaactattgtgcataaatgattccttatatttt 257
Query: 1871 gtaataattaatttagtaatgaaactaattaaaaaaaatttcaacaaccatatattatat 1930
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 256 gtaataataaatttagtaatgaaactaattaaaaaaagtttcaacaaccatatattatat 197
Query: 1931 cgggaacaaaaaaacatcaagtcatttttgtctaaacagtaaacatcctcacaatcataa 1990
||||||||||||||||||||||||||||||||| ||| ||||| || ||| |||||||||
Sbjct: 196 cgggaacaaaaaaacatcaagtcatttttgtcttaacggtaaatattctcgcaatcataa 137
Query: 1991 aacatgttc 1999
|||||||||
Sbjct: 136 aacatgttc 128
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 295,056
Number of extensions: 8567
Number of successful extensions: 8567
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8565
Number of HSP's successfully gapped: 1
Length of query: 2008
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1991
Effective length of database: 8,119,229
Effective search space: 16165384939
Effective search space used: 16165384939
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)