BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16580 (UTR included)
(2017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1990_C1 1606 0.0
>BF14_1990_C1
Length = 818
Score = 1606 bits (810), Expect = 0.0
Identities = 813/814 (99%)
Strand = Plus / Plus
Query: 427 acgtaatatgtaattttattgcaatttgaactacgacgtttgtgcgcaataaaaatagtg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 acgtaatatgtaattttattgcaatttgaactacgacgtttgtgcgcaataaaaatagtg 61
Query: 487 gtgatcttgatataatgacagattttacgatgttgtcgtcagatgtgatcaaatacgtgg 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtgatcttgatataatgacagattttacgatgttgtcgtcagatgtgatcaaatacgtgg 121
Query: 547 ctgtacctgtgtctctagcagtcgcactgggattgatacgaaaatggagatcaaggaatt 606
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctgttcctgtgtctctagcagtcgcactgggattgatacgaaaatggagatcaaggaatt 181
Query: 607 gggcaaagtgtacgagcaacacttgtttaaggggcaagacctttcttattacgggtgcca 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gggcaaagtgtacgagcaacacttgtttaaggggcaagacctttcttattacgggtgcca 241
Query: 667 ctagtggtatcggattggaaacggcacgagctctggtgaagaggaaggctcgcgtgatat 726
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctagtggtatcggattggaaacggcacgagctctggtgaagaggaaggctcgcgtgatat 301
Query: 727 ttgcttgtagagacatcgataaagcaaagaaagtggttgcagaaattcgaacagaatgcg 786
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttgcttgtagagacatcgataaagcaaagaaagtggttgcagaaattcgaacagaatgcg 361
Query: 787 acggcggcgaattgataccaatgcaattggatcttgcatctttcacatcaattgaaaagt 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 acggcggcgaattgataccaatgcaattggatcttgcatctttcacatcaattgaaaagt 421
Query: 847 tcgtagatgttgtgaaggccggattttataaaattgatgtattaatcaacaatgcaggcg 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcgtagatgttgtgaaggccggattttataaaattgatgtattaatcaacaatgcaggcg 481
Query: 907 tggccataccattacaattagaccagaagacaaaagagggttttgaaatacatttgggtg 966
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tggccataccattacaattagaccagaagacaaaagagggttttgaaatacatttgggtg 541
Query: 967 ttaaccacttgggacacttctatctcacaaatttattaattgatttgttaaaaaaagctg 1026
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ttaaccacttgggacacttctatctcacaaatttattaattgatttgttaaaaaaagctg 601
Query: 1027 ctccgagtcgaattgttattgtcacatcaaccctacatgagaaggccaaactggattttg 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ctccgagtcgaattgttattgtcacatcaaccctacatgagaaggccaaactggattttg 661
Query: 1087 acaacctatatgtggaagaccaaatcgagaaggccaaattaggaaaacgttaccgccaca 1146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 acaacctatatgtggaagaccaaatcgagaaggccaaattaggaaaacgttaccgccaca 721
Query: 1147 accccggctactgtaactcaaaactcatgaatctataccacgcacgggcattggctgcaa 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 accccggctactgtaactcaaaactcatgaatctataccacgcacgggcattggctgcaa 781
Query: 1207 aatataggaactcaggaatagacgtgtacgcctg 1240
||||||||||||||||||||||||||||||||||
Sbjct: 782 aatataggaactcaggaatagacgtgtacgcctg 815
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 273,806
Number of extensions: 6961
Number of successful extensions: 6961
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6959
Number of HSP's successfully gapped: 1
Length of query: 2017
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2000
Effective length of database: 8,119,229
Effective search space: 16238458000
Effective search space used: 16238458000
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)