BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16598 (UTR included)
(1867 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B2A09 1096 0.0
>BF01029B2A09
Length = 662
Score = 1096 bits (553), Expect = 0.0
Identities = 609/628 (96%), Gaps = 1/628 (0%)
Strand = Plus / Plus
Query: 371 tttccctttctcatcaaattttactattaaagggataaaattacgttcatattaatatta 430
|||||||||||||||||||||||||| | || ||||||||||||||||||| || |||
Sbjct: 1 tttccctttctcatcaaattttactactgaaaggataaaattacgttcatactannntta 60
Query: 431 taagataaaaaatgaattagttgttgtgataggaactttaaatcccttatattcattaaa 490
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||
Sbjct: 61 taagataaaaaatgaattagttgttgtaataggaactttaaatcccttatatacatttaa 120
Query: 491 aaaaatt-ataatgtccaaacgagtagcatcagtcgcatttaatgataatgttgatagga 549
||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 121 aaaaatttataatgtccaaacgagtagcatcagtcgcttttaatgaaaatgttgatagga 180
Query: 550 aagttgttaaagatggaaagaagcattccttggattccgacgaggaggatagtggtgccg 609
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 aagttgttaaagatggaaagaagcattccttggattctgacgaggaggatagtggtgccg 240
Query: 610 aggatgaaaaacgtaatgtgttaaacgctgatgatatagaaggcgaagaagatggcgcag 669
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aggatgaaaaacgtaatgtattaaacgctgatgatatagaaggcgaagaagatggcgcag 300
Query: 670 gcggcatggaaggtgaaataacaataacaccattcaatatgaaggaggaattggaagaag 729
| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 301 gtggcatggaaggtgaaataacaataacaccattcaatatgaaagaggaattggaagaag 360
Query: 730 gtcattttgacacccaaggtcattatcattggaaaaaagaaaaggaaattagggatagtt 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcattttgacacccaaggtcattatcattggaaaaaagaaaaggaaattagggatagtt 420
Query: 790 ggctggataatattgattgggtaaaggtaaaagatcgacctgacaataaatataagatac 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggctggataatattgattgggtaaaggtaaaagatcgacctgacaataaatataagatac 480
Query: 850 ataaaccagaaggtgaaatgagtgtgctagatgatacagattccgattcagaagaagaaa 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataaaccagaaggtgaaatgagtgtgctagatgatacagattccgattcagaagaagaaa 540
Query: 910 aggaaatggaaaagtttgatttaataagaaattacaaagaaattgtaagtcatatgaaac 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggaaatggaaaagtttgatttaataagaaattacaaagaaattgtaagtcatatgaaac 600
Query: 970 cgaaggagacaattgctaaaacattaca 997
|||| ||||||||||||||||||||||
Sbjct: 601 cgaannagacaattgctaaaacattaca 628
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 331,574
Number of extensions: 8239
Number of successful extensions: 8239
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8236
Number of HSP's successfully gapped: 1
Length of query: 1867
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1850
Effective length of database: 8,119,229
Effective search space: 15020573650
Effective search space used: 15020573650
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)