BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16618 (UTR included)
(1309 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1737_C1 1269 0.0
>BF14_1737_C1
Length = 648
Score = 1269 bits (640), Expect = 0.0
Identities = 646/648 (99%)
Strand = Plus / Plus
Query: 464 cgcttgttatttgattaattatattataacttcaacaatgtcgactccggaggaaactgc 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgcttgttatttgattaattatattataacttcaacaatgtcgactccggaggaaactgc 60
Query: 524 tcaacttaaggctggccatcccccagcagtgaaggctggcggcatgagaataacacaaca 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcaacttaaggctggccatcccccagcagtgaaggctggcggcatgagaataacacaaca 120
Query: 584 taaaacaggacatgtgaaagagtccaaggatgttgtacatactgaagacctcaccggact 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaaacaggacatgtgaaagagtccaaggatgttgtacatactgaagacctcaccggact 180
Query: 644 cgccggtatagccccagttccaatcaacccagtgcttacatcgggggctccaaacaaagg 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cgccggtatagccccagttccaatcaacccagtgcttacatcgggggctccaaacaaagg 240
Query: 704 caacacggacttcacaccacaagcggcacaggtggcccacagtccaaagcctcccgctta 763
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 caacacggacttcacaccacaagcggcacaggtggcccacagtccaaagcctcccgctca 300
Query: 764 tataaatattaagccggctaccaacattcaacagcctaggaagtgaacttagctgtatga 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tataaatattaagccggctaccaacattcaacagcctaggaagtgaacttagctgtatga 360
Query: 824 catatcaacaacatgttaggtgtttcaagattttaaaataacatataagtttcatggttt 883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catatcaacaacatgttaggtgtttcaagattttaaaataacatataagtttcatggttt 420
Query: 884 ttcatctttaacagataatatatatgacgcctaacataaactgctcaccatacacatggt 943
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcatctttaactgataatatatatgacgcctaacataaactgctcaccatacacatggt 480
Query: 944 tataaaccattgtaatgattgctgggaaccataatgatttaattgcaacatttttccttt 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tataaaccattgtaatgattgctgggaaccataatgatttaattgcaacatttttccttt 540
Query: 1004 taattataagaatatataaaatatatgaataactgtttccttatctctcataataagtta 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taattataagaatatataaaatatatgaataactgtttccttatctctcataataagtta 600
Query: 1064 tatttgtactcaaaatattaatatatatacataaaagtattttgagag 1111
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tatttgtactcaaaatattaatatatatacataaaagtattttgagag 648
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 299,255
Number of extensions: 20517
Number of successful extensions: 20517
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 20517
Number of HSP's successfully gapped: 1
Length of query: 1309
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1292
Effective length of database: 8,119,229
Effective search space: 10490043868
Effective search space used: 10490043868
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)