BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16627 (UTR included)
(1837 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030A2C06 168 2e-41
BF01055A2F06 155 3e-37
BF01055A2B03 139 2e-32
BF01016B1A11 129 2e-29
BF01014B2B09 109 2e-23
BF14_911_C2 109 2e-23
BF01056B1D01 78 6e-14
>BF01030A2C06
Length = 599
Score = 168 bits (85), Expect = 2e-41
Identities = 134/150 (89%), Gaps = 4/150 (2%)
Strand = Plus / Plus
Query: 8 aaaacttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgggtggt 67
|||||||||||||||||||||||||||||| ||| |||| |||||| |||||||| |
Sbjct: 432 aaaacttaacaaattatatactaaaaccttcctcgagaatcacgctttcgagtgg----t 487
Query: 68 gataactgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacagactgac 127
| ||||||||||||| | |||||| |||||||||||||||||||||||||||||| |||
Sbjct: 488 ggtaactgtttgatatttggtgcagcagtttttccgtttatcgcgaacagacagacagac 547
Query: 128 agacgcggcgaggaactttgttttataata 157
|||||| |||||| ||||||||||||||||
Sbjct: 548 agacgccgcgagggactttgttttataata 577
>BF01055A2F06
Length = 787
Score = 155 bits (78), Expect = 3e-37
Identities = 133/151 (88%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 8 aaaacttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgggtggt 67
||||||||| |||||||| ||||||||||| ||| |||| |||||||||||| || |
Sbjct: 745 aaaacttaataaattatacactaaaaccttcctcgagaatcacgctatcgagcgg----t 690
Query: 68 gataactgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacagactgac 127
|||||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||| |||
Sbjct: 689 gataactgtttgataatcggtgcagtagtttttctgtttatctcgatcagacagacagac 630
Query: 128 agacgcggcgaggaactttgttttataatat 158
||| || |||||| |||||||||||||||||
Sbjct: 629 agaagcagcgagggactttgttttataatat 599
>BF01055A2B03
Length = 776
Score = 139 bits (70), Expect = 2e-32
Identities = 116/131 (88%), Gaps = 4/131 (3%)
Strand = Plus / Plus
Query: 8 aaaacttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgggtggt 67
||||||||||||||| |||||||||||||| ||| || | ||||||||||||||| |
Sbjct: 497 aaaacttaacaaattgtatactaaaaccttcctcgaggatcacgctatcgagtgg----t 552
Query: 68 gataactgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacagactgac 127
|||||||||||||| ||| |||| ||||||||||||||||||||||||| |||||| |||
Sbjct: 553 gataactgtttgatgatcggtgctgtagtttttccgtttatcgcgaacaaacagacggac 612
Query: 128 agacgcggcga 138
||||||||||
Sbjct: 613 ggacgcggcga 623
>BF01016B1A11
Length = 786
Score = 129 bits (65), Expect = 2e-29
Identities = 102/114 (89%), Gaps = 4/114 (3%)
Strand = Plus / Plus
Query: 8 aaaacttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgggtggt 67
|||||| ||||||||||| ||||||||||| ||| |||| ||||||||| ||||||
Sbjct: 458 aaaactaaacaaattataaactaaaacctttctcgagaatcacgctatc----tggtggt 513
Query: 68 gataactgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacag 121
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct: 514 gataactgtttgataatcggtgcagtagtttttccttttatcgcgaacagacag 567
>BF01014B2B09
Length = 794
Score = 109 bits (55), Expect = 2e-23
Identities = 125/148 (84%), Gaps = 4/148 (2%)
Strand = Plus / Minus
Query: 13 ttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgggtggtgataa 72
||||||||||||||| ||||||||| |||||||| ||||||||||| || ||| ||
Sbjct: 359 ttaacaaattatatattaaaacctttctcaagaatcacgctatcgactga----tgaaaa 304
Query: 73 ctgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacagactgacagacg 132
| | |||| |||| ||| ||||||||||| |||||| ||||||||||||| ||||||||
Sbjct: 303 ccgcttgacaatcggtgtagtagtttttctgtttattgcgaacagacagatagacagacg 244
Query: 133 cggcgaggaactttgttttataatatgt 160
||||| || ||||| ||| |||||||||
Sbjct: 243 cggcggggtactttatttaataatatgt 216
>BF14_911_C2
Length = 1025
Score = 109 bits (55), Expect = 2e-23
Identities = 76/83 (91%)
Strand = Plus / Plus
Query: 63 gtggtgataactgtttgataatcagtgcagtagtttttccgtttatcgcgaacagacaga 122
||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||
Sbjct: 247 gtggtgataactgtttgataatcgctgcagtagtttttccgtttctcgggaacacacaga 306
Query: 123 ctgacagacgcggcgaggaactt 145
| |||||||||||||||| ||||
Sbjct: 307 cagacagacgcggcgagggactt 329
>BF01056B1D01
Length = 838
Score = 77.8 bits (39), Expect = 6e-14
Identities = 51/55 (92%)
Strand = Plus / Plus
Query: 8 aaaacttaacaaattatatactaaaaccttactcaagaaacacgctatcgagtgg 62
|||||||||||||||||||||||||||||| ||| |||| |||||| ||||||||
Sbjct: 768 aaaacttaacaaattatatactaaaaccttcctcgagaatcacgctttcgagtgg 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,334
Number of extensions: 14432
Number of successful extensions: 14432
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 14429
Number of HSP's successfully gapped: 8
Length of query: 1837
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1820
Effective length of database: 8,119,229
Effective search space: 14776996780
Effective search space used: 14776996780
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)