BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16632 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01045A1B09 797 0.0
>BF01045A1B09
Length = 866
Score = 797 bits (402), Expect = 0.0
Identities = 432/445 (97%)
Strand = Plus / Plus
Query: 676 ttaaattgttcgaagagaatgaagagcttctacatctatttgaaaagttccgagagctgc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ttaaattgttcgaagagaatgaagagcttctacatctatttgaaaagttccgagagctgc 481
Query: 736 gcaccaaagaagctatagtcagttctgcggaactggccgagcacgctacacaggtgatgc 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcaccaaagaagctatagtcagttctgcggaactggccgagcacgctacacaggtgatgc 541
Query: 796 acacactagacgagggcatcaaggggctggcggatatggactcattcttcacttacgtca 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acacactagacgagggcatcaaggggctggcggatatggactcattcttcacttacgtca 601
Query: 856 gacacgtgggtggcacgcatcgccaggtgcccgggtttaaagcagaaaactttatgaaaa 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gacacgtgggtggcacgcatcgccaggtgcccgggtttaaagcagaaaactttatgaaaa 661
Query: 916 tcgagcaacccttccttgaagcagccaagacaaccttgggagagagatacaccccgaata 975
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 662 tcgagcaacccttccttgaagcagccaagacaaccttgggagagagatataccccgaata 721
Query: 976 ttgaaaatatatacaagttaacaatacggttcattttagagaatctggtcaaaggttacg 1035
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 722 ttgaaaatatatacaagttaacaatacgattcatattagagaatctggtcaaaggttacg 781
Query: 1036 aggaggcaggggaggaaaacggaacgacacaaacctgaattacattagccactattagtt 1095
||||| | ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 782 nnnaggcanngnnngaaaacggaacgacacaaacctgaattacattagcnactattagtt 841
Query: 1096 tttacttctccagttaatttacaat 1120
||||||||| |||||||||||||||
Sbjct: 842 tttacttcttcagttaatttacaat 866
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,859
Number of extensions: 5623
Number of successful extensions: 5623
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5623
Number of HSP's successfully gapped: 1
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)