BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16635 (UTR included)
(3805 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1G05 1241 0.0
BF01025A1G01 438 e-122
>BF01062B1G05
Length = 766
Score = 1241 bits (626), Expect = 0.0
Identities = 641/646 (99%)
Strand = Plus / Plus
Query: 2692 ctggtcttggagaatttcgaattcgcgacctgaacgacgaaatcaacaaacttatgagag 2751
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ctggtcttggtgaatttcgaattcgcgacctgaacgacgaaatcaacaaacttatgagag 167
Query: 2752 agaaacgacactgggaggtacaaattaaatctctcggaggtcctgatcatgctcgagtcg 2811
|||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 168 agaaacgacattgggaagtacaaattaaatctctcggaggtccagatcatgctcgagtcg 227
Query: 2812 gtccaaggatgttggaccaagacggtaaagaggtgccgggtaatagagggtacaaatatt 2871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtccaaggatgttggaccaagacggtaaagaggtgccgggtaatagagggtacaaatatt 287
Query: 2872 ttggagctgcaaaagacttgccaggtgtccgcgagttgttcgagcaggagccgccggcgg 2931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttggagctgcaaaagacttgccaggtgtccgcgagttgttcgagcaggagccgccggcgg 347
Query: 2932 cgccgcgccggacacgagctgacctcatgagggacgtggatgctgattactacgggtaca 2991
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 348 cgccgcgccggacacgagctgacctcatgagggacgtggatgctgattactacggataca 407
Query: 2992 gagacgacgaggacggactactgctgccgcttgagagagaagcagagatagatgctatag 3051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gagacgacgaggacggactactgctgccgcttgagagagaagcagagatagatgctatag 467
Query: 3052 ccagggcagttgatgaatggaagagaaataaagacgagacaagagatcaagacattccag 3111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ccagggcagttgatgaatggaagagaaataaagacgagacaagagatcaagacattccag 527
Query: 3112 aggaagaaaatatttacccagaagatcctgaagataagagaataatagatgaagacgagg 3171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 aggaagaaaatatttacccagaagatcctgaagataagagaataatagatgaagacgagg 587
Query: 3172 acggaaaacccgcggtgacgtcacacgttgcagtcccctcccagaaggatgtagaagaag 3231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 acggaaaacccgcggtgacgtcacacgttgcagtcccctcccagaaggatgtagaagaag 647
Query: 3232 cacttttaaaacggaagaagcaagaactactagaaagatatggttgtttagatgttaaga 3291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 cacttttaaaacggaagaagcaagaactactagaaagatatggttgtttagatgttaaga 707
Query: 3292 tggagggcagctaacctttaaggaaatatagaatatgtttcgcgaa 3337
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tggagggcagctaacctttaaggaaatatagaatatgtttcgcgaa 753
Score = 212 bits (107), Expect = 3e-54
Identities = 107/107 (100%)
Strand = Plus / Plus
Query: 614 gcgaaggccctatctagcatctgaatgtaacagtctacaacaagcagaaaaatggagact 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcgaaggccctatctagcatctgaatgtaacagtctacaacaagcagaaaaatggagact 60
Query: 674 gcaaatagtgagagaaattgccaaaaaggtggcacagatacaaaatg 720
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gcaaatagtgagagaaattgccaaaaaggtggcacagatacaaaatg 107
>BF01025A1G01
Length = 792
Score = 438 bits (221), Expect = e-122
Identities = 233/237 (98%)
Strand = Plus / Minus
Query: 170 ttgacaatagtaataaactgtatctgaccatgttttgttaacatgcatacaattaataag 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttgacaatagtaataaactgtatctgaccatgttttgttaacatgcatacaattaataag 267
Query: 230 ggaattaatatcaagactcttgaaaattaatatcagtatatcagaaggacaatttatcca 289
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 266 tgaattaatatcaagactcttgaaaattaatattagtatatcagaaggacaatttatcca 207
Query: 290 aaaggaatcgtcgaaatcgagagctaccgacattgttagcaaaatacttcagtatataag 349
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 206 aaaggaatcgtcgaaatcgagagctaccgacattgttggcaaaatacttcagtatataag 147
Query: 350 acatatgccgttagtaaaaccgttacactatattttaatataatttatatttatttt 406
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 146 acatatgccgttagtaaaaccgttatactatattttaatataatttatatttatttt 90
Score = 105 bits (53), Expect = 5e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 2 aaaccatttttatgagaaattttctctaaaagttttccccagaggttataatg 54
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aaaccatttttatgagaaattttctctaaaagttttccccagaggttataatg 327
Score = 75.8 bits (38), Expect = 5e-13
Identities = 75/86 (87%), Gaps = 6/86 (6%)
Strand = Plus / Minus
Query: 371 gttacactatattttaatataatttatatttatttttcgacggtttgtttgta----tat 426
|||| ||||||||||||||||||||||||||||||| | |||||||||||| | |
Sbjct: 84 gttatactatattttaatataatttatatttatttt--gtaggtttgtttgtatttttgt 27
Query: 427 ttgataaatacgcaataacttttgac 452
||||||||||| ||||||||||||||
Sbjct: 26 ttgataaatactcaataacttttgac 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 510,179
Number of extensions: 11641
Number of successful extensions: 11641
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 11637
Number of HSP's successfully gapped: 5
Length of query: 3805
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3787
Effective length of database: 8,109,745
Effective search space: 30711604315
Effective search space used: 30711604315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)