BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16637 (UTR included)
(6676 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B1C01 1445 0.0
BF01060B2B09 1425 0.0
>BF01062B1C01
Length = 791
Score = 1445 bits (729), Expect = 0.0
Identities = 747/753 (99%)
Strand = Plus / Plus
Query: 5515 agagacacgctctcttggctctgagtcacgctctgcccgcggccgaccatcagcggttca 5574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 agagacacgctctcttggctctgagtcacgctctgcccgcggccgaccatcagcggttca 72
Query: 5575 ccagtctatatgaaatcgtcaaacagatactgaccaaggatgaattttcgatggacaaag 5634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 ccagtctatatgaaatcgtcaaacagatactgaccaaggatgaattttcgatggacaaag 132
Query: 5635 attcagatgaggaggataatgagggcgtcagacagagacgagaacagctcactgctttga 5694
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 attcagatgaggaggataacgagggcgtcagacagagacgagaacagctcactgctttga 192
Query: 5695 aggaagcagcttacgatttattgggcaaagcctggccgaaggatcctgatactcaagaaa 5754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aggaagcagcttacgatttattgggcaaagcctggccgaaggatcctgatactcaagaaa 252
Query: 5755 agtaccaagaattatatttcgagcattgttcgaaatcgtatccgacaagttcaagatcaa 5814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agtaccaagaattatatttcgagcattgttcgaaatcgtatccgacaagttcaagatcaa 312
Query: 5815 ctcaattggcaattctggcgtccatctcgaaggttctggaacgactggcggtgttgaatg 5874
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctcaattggcaattctggcgtccatctcgaaggttctggaacgactggcggtgttgaatg 372
Query: 5875 atccggagccgatggaaaccgacaactcgtccgcgtataccaggaaccaagtcatagcta 5934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atccggagccgatggaaaccgacaactcgtccgcgtataccaggaaccaagtcatagcta 432
Query: 5935 ctgtcacggaacacgtcacaagtatcatcgaatacacgctcaagaatagcaaccaagtaa 5994
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctgtcacagaacacgtcacaagtatcatcgaatacacgctcaagaatagcaaccaagtaa 492
Query: 5995 gacaccgacgggacgccttaaaccttatggaaattttgattaaacaattgaaagaacttc 6054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gacaccgacgggacgccttaaaccttatggaaattttgattaaacaattgaaagaacttc 552
Query: 6055 acaaagcggaggaattgaataaactaaaagcaatttatcagacacatgtccaagacttgt 6114
|||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 553 acaaagcggaggaattgaataaactaaaagcaatatatcagacacacgtccaagacttgt 612
Query: 6115 cgagagaagaatctcatgagttgagagcaaaagtagacaacattaaagtacacttcaaat 6174
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 cgagagaagaatctcatgaattgagagcaaaagtagacaacattaaagtacacttcaaat 672
Query: 6175 aacacgagtccagtgttaccattgttatacaatgtagtatattacgtgcgcgcgtcgacg 6234
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 673 aacacgagtccagtgttaccattgttatacaatgtagtatattacgtgcgcgcatcgacg 732
Query: 6235 acattgatatattaatatatgataaaaatattc 6267
|||||||||||||||||||||||||||||||||
Sbjct: 733 acattgatatattaatatatgataaaaatattc 765
>BF01060B2B09
Length = 755
Score = 1425 bits (719), Expect = 0.0
Identities = 743/752 (98%)
Strand = Plus / Plus
Query: 3798 ggcaccgcgcccactggtggaaacctttcaacttacaaagaactgtgctccttagcgtcc 3857
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1 ggcaccgcgcccactggtggaaacctttcaacttannnagaactgtgctccttagcgtct 60
Query: 3858 gatttgaaccagccggatcttctctacaagttcatgcatttagcacatcacaactccatt 3917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatttgaaccagccggatcttctctacaagttcatgcatttagcacatcacaactccatt 120
Query: 3918 tggaattccaaacgaggcgcggcgttcggtttccaatctctaacagcggcggcggggggg 3977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggaattccaaacgaggcgcggcgttcggtttccaatctctaacagcggcggcggggggg 180
Query: 3978 tccctgtcgacccacctgcctcgtatcgtgccccgtctgtaccggtaccggttcgacccc 4037
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 tccctgtcgacccacctgcctcgtatcgtgccccgtctgtaccgctaccggttcgacccc 240
Query: 4038 acgcctcgcatacagaactccatggccgccatatggagcgccctcgtctccaacacgccg 4097
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 acgcctcgcatacaaaactccatggccgccatatggaacgccctcgtctccaacacgccg 300
Query: 4098 gccacggtgcagaaataccataaggaaatattaaaagacttggtgagcaacttgacgtcc 4157
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccacggtgcagaaatatcataaggaaatattaaaagacttggtgagcaacttgacgtcc 360
Query: 4158 aaccaatggagggtgcggatgtcgtgttgcaatgcactcgctgaccttttgaggggcgcg 4217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaccaatggagggtgcggatgtcgtgttgcaatgcactcgctgaccttttgaggggcgcg 420
Query: 4218 cagagtctacacgattctttggagcatttaccgactatttggactcaactgttccgagtc 4277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagagtctacacgattctttggagcatttaccgactatttggactcaactgttccgagtc 480
Query: 4278 atggacgacgtccacgaggggacgcgccaggcggcgacatctacagccaacgtgctttcc 4337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atggacgacgtccacgaggggacgcgccaggcggcgacatctacagccaacgtgctttcc 540
Query: 4338 aaactatgtatccaggctacagacgtgaagcaaggcaaagacggaaaggaaatattgtca 4397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaactatgtatccaggctacagacgtgaagcaaggcaaagacggaaaggaaatattgtca 600
Query: 4398 gccatactaccggtgttgttggacaccggcatcacgaatctcgttaaagaagtcagaagt 4457
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 601 gccatactaccggtgttgttggacaccggcatcacgaatctcgtcaaagaagtcagaagt 660
Query: 4458 gtgagtctgcagacggtgtcgatgttggtgtcgtcagcggggtcgtccctggcccccctg 4517
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtgagtctgcagacggtgtcgatgttggtgtcgtcagcggggtcgtccctggcccccctg 720
Query: 4518 ctgccccggctggtgccagccctggcggcggc 4549
||||||||||||||||||||||||||||||||
Sbjct: 721 ctgccccggctggtgccagccctggcggcggc 752
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 106,582
Number of extensions: 13049
Number of successful extensions: 13049
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 13049
Number of HSP's successfully gapped: 2
Length of query: 6676
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6658
Effective length of database: 8,109,745
Effective search space: 53994682210
Effective search space used: 53994682210
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)