BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16642 (UTR included)
(2380 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015A1F10 1344 0.0
BF01021B2G04 537 e-152
>BF01015A1F10
Length = 698
Score = 1344 bits (678), Expect = 0.0
Identities = 693/698 (99%), Gaps = 1/698 (0%)
Strand = Plus / Plus
Query: 445 gggccatctcatgctatgattttatttttataaggtaaaactaataaaattacgaaatgg 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggccatctcatgctatgattttatttttataaggtaaaactaataaaattacgaaatgg 60
Query: 505 ctgatgttaaggttcttgaaaatgataaaaacattgaaaacgaagaggaggaagacgagg 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatgttaaggttcttgaaaatgataaaaacattgaaaacgaagaggaggaagacgagg 120
Query: 565 gtgattgtatagaagagtcagaaaacaaagaccctgctaaaaagaaaaaaaagaaaaaga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgattgtatagaagagtcagaaaacaaagaccctgctaaaaagaaaaaaaagaaaaaga 180
Query: 625 agaagaagaagacagcgggaactgaagttccggctgagaatgactcggaggtatcagtga 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agaagaagaagacagcgggaactgaagttccggctgagaatgactcggaggtatcagtga 240
Query: 685 aaccattaacaattgaagaaaatatagttgaaggagatgaaaagaaaaaaaagaagaaga 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaccattaacaattgaagaaaatatagttgaaggagatgaaaagaaaaaaaagaagaaga 300
Query: 745 ataagaacaaggtcgctgggaaagtccaaactaaccctcccacgattccaatttccgaat 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataagaacaaggtcgctgggaaagtccaaactaaccctcccacgattccaatttccgaat 360
Query: 805 tatttccggacggtaacttccccgagggtcaaataatggagcatggccctgctgaaggta 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tatttccggacggtaacttccccgagggtcaaataatggagcatggccctgctgaaggta 420
Query: 865 ttgatgacagaacagctaaagaccgttttagtagtgaagaaaagagggcattagacagga 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttgatgacagaacagctaaagaccgttttagtagtgaagaaaagagggcattagacagga 480
Query: 925 tgcataactacatttatcaagaaataagacaagctgccgaggctcacagacagacaagaa 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgcataactacatttatcaagaaataagacaagctgccgaggctcacagacagacaagaa 540
Query: 985 aatatataaaagactggataaaaccgggcatgaccatgatccaaatctgtgaagagcttg 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatatataaaagactggataaaaccgggcatgaccatgatccaaatctgtgaagagcttg 600
Query: 1045 aggctacaggaagacgtctcattggagaagatggtctcaaagcaggactggcc-ttccct 1103
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 601 aggctacaggaagacgtctcattggagaagatggtctcaaagcnnnnctggcctttccct 660
Query: 1104 acaggctgcagtcgcaatcattgcgccgctcactatac 1141
||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acaggctgcagtcgcaatcattgcgccgctcactatac 698
>BF01021B2G04
Length = 283
Score = 537 bits (271), Expect = e-152
Identities = 280/283 (98%)
Strand = Plus / Plus
Query: 1097 cttccctacaggctgcagtcgcaatcattgcgccgctcactatacaccaaacactggtga 1156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttccctacaggctgcagtcgcaatcattgcgccgctcactatacaccaaacactggtga 60
Query: 1157 caataccgttcttgagtatgatgatgtagtgaaaattgactttggtactcatatcaatgg 1216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caataccgttcttgagtatgatgatgtagtgaaaattgactttggtactcatatcaatgg 120
Query: 1217 acgtattattgattgtgccttcacactgcatttcaatcctcgttatgatcctcttgtgaa 1276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgtattattgattgtgccttcacactgcatttcaatcctcgttatgatcctcttgtgaa 180
Query: 1277 gggggttcaagaagctactgaagcaggaatcaaagcttcaggtgttgatgtcaggctttg 1336
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 181 gggggttcaagaagctactgaagcatgaatcaaagcttcaggtgttgatgtaaggctttg 240
Query: 1337 tgatgttggtgctgctgtgcaagaggttatggaatcacatgaa 1379
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 241 tgatgttggtgctgctgtgcaagaggttatggaatcacgtgaa 283
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,646
Number of extensions: 7990
Number of successful extensions: 7990
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7979
Number of HSP's successfully gapped: 2
Length of query: 2380
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2363
Effective length of database: 8,119,229
Effective search space: 19185738127
Effective search space used: 19185738127
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)