BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16643 (UTR included)
(2104 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3333_C1 1556 0.0
>BF14_3333_C1
Length = 797
Score = 1556 bits (785), Expect = 0.0
Identities = 795/797 (99%), Gaps = 1/797 (0%)
Strand = Plus / Plus
Query: 373 agtttgtgtatacagtaattccactcagaattaagcatgtaaacaattcattaaagttat 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtttgtgtatacagtaattccactcagaattaagcatgtaaacaattcattaaagttat 60
Query: 433 aacaattgtacacaattaccaaacttcaaatatatattttctaaaactaaattttttaaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacaattgtacacaattaccaaacttcaaatatatattttctaaaactaaattttttaaa 120
Query: 493 aattcaatatgtctgtagataatttaggattcctgaatgaaatctctcctatgtttcgac 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aattcaatatgtctgtagataatttaggattcctgaatgaaatctctcctatgtttcgac 180
Query: 553 cttacattcagagtatataccaggatttaaaactaggtctctgcaaagccaaggtagatt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cttacattcagagtatataccaggatttaaaactaggtctctgcaaagccaaggtagatt 240
Query: 613 tggaaagaatcggcggtaattcaagtggagctgagagtcagtttagattggtgcttcctt 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaaagaatcggcggtaattcaagtggagctgagagtcagtttagattggtgcttcctt 300
Query: 673 actgttcaaaa-aaattaaaatgggatgtaatatttgatacttcgacgccatggtttgca 731
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actgttcaaaaaaaattaaaatgggatgtaatatttgatacttcgacgccatggtttgca 360
Query: 732 cctgactttcgatttgatgatgacagtttcttgagcagtgcaaatgaagattatttaaca 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cctgactttcgatttgatgatgacagtttcttgagcagtgcaaatgaagattatttaaca 420
Query: 792 aaaagtgttcctagtttgactaattgggatgcaaataatccaaaatcacttggcgatgtt 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaagtgttcctagtttgactaattgggatgcaaataatccaaaatcacttggcgatgtt 480
Query: 852 ttatcggaattgattaaattgtataaaatacatcaggtccgaaagctccatgaagatgca 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttatcggaattgattaaattgtataaaatacatcaggtccgaaagctccatgaagatgca 540
Query: 912 aactctcgagcatctttcgaatacagtgccttgatggggaatgctctgacaacagagaaa 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aactctcgagcatctttcgaatacagtgccttgatggggaatgctctgacaacagagaaa 600
Query: 972 gatgtagaggtgtgggttggtggacatattgttgaatttcttattaagcttaaagtggat 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgtagaggtgtgggttggtggacatattgttgaatttcttattaagcttaaagtggat 660
Query: 1032 gtcttacgattaccagaattatataatgatgggactgaacaaaatccaggcatagataca 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcttacgattaccagaattatataatgatgggactgaacaaaatccaggcatagataca 720
Query: 1092 gctctgttacttgttagatatccaaattcaacaaatgcagaattaattttatcaccgttt 1151
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gctctgctacttgttagatatccaaattcaacaaatgcagaattaattttatcaccgttt 780
Query: 1152 ctgactaaagttcttgg 1168
|||||||||||||||||
Sbjct: 781 ctgactaaagttcttgg 797
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,560
Number of extensions: 7704
Number of successful extensions: 7704
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7703
Number of HSP's successfully gapped: 1
Length of query: 2104
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2087
Effective length of database: 8,119,229
Effective search space: 16944830923
Effective search space used: 16944830923
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)