BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16644 (UTR included)
(2998 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01018B1C01 1560 0.0
>BF01018B1C01
Length = 822
Score = 1560 bits (787), Expect = 0.0
Identities = 805/811 (99%)
Strand = Plus / Plus
Query: 387 agtaggtaatcacttaataagaagctcagtaataaattaaactgaaacaatgtacaaaga 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 agtaggtaatcacttaataagaagctcagtaataaattaaactgaaacaatgtacaaaga 71
Query: 447 atctgcctgatatcacttttataatattaattacttgaaatatttttatttaaaatgggt 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atctgcctgatatcacttttataatattaattacttgaaatatttttatttaaaatgggt 131
Query: 507 tgcacgcaaagcgagattgctcctcaaaatgaaacgcccaaaaaaggctgcactgatgta 566
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132 tgcacgcaaagtgagattgctcctcaaaatgaaacgcccaaaaaaggctgtactgatgta 191
Query: 567 ttatggcttgttatatatattatattttggattctaatgattattattgcggctatatct 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttatggcttgttatatatattatattttggattctaatgattattattgcggctatatct 251
Query: 627 tttgtttacggaaatcctcagagattaataaatggatatgattcattcggcaatacatgc 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tttgtttacggaaatcctcagagattaataaatggatatgattcattcggcaatacatgc 311
Query: 687 ggtgtcaagaataacaagaaacttataaatttcccattagctggtatcagtactgctgat 746
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggtgtcaagagtaacaagaaacttataaatttcccattagctggtatcagtactgctgat 371
Query: 747 aaaagttatttattttttatggatattaaggaacttcgaagatcacttaaaatatgcgtt 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aaaagttatttattttttatggatattaaggaacttcgaagatcacttaaaatatgcgtt 431
Query: 807 aaacaatgccccaataaaaagttggaatcattcaatgatctgcaaaacttttaccgggag 866
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 432 aaacaatgccccaataaaaagttggaatcattcaatgacctgcaaaacttttaccgggag 491
Query: 867 actggatcaaatctctgcagatacgatatccatttgaataatgtaacaagcaccaaagat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 actggatcaaatctctgcagatacgatatccatttgaataatgtaacaagcaccaaagat 551
Query: 927 ctgcacaattttataggtccttgtccaacattgcctgtatatgagtcatttccactttta 986
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ctgcacaattttataggtccttgtccaacattgcctgtatatgagtcatttccactttta 611
Query: 987 aatagatgttttcctaaatctgctaaagatttagctcagaaagttttcagtgatttttat 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 612 aatagatgttttcctaaatctgctaaagatttagctcagaaagttttcagtgacttttat 671
Query: 1047 gacttactaaatagttgggataccatcgaacagatgttatcagacctgtactcatcttgg 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gacttactaaatagttgggataccatcgaacagatgttatcagacctgtactcatcttgg 731
Query: 1107 aaggaaatgattatttgtgttataattgcatttatttgttcattgatcatggtatcaatc 1166
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 732 aaggaaatgattatttgtgttataattgcatttattagttcattgatcatggtatcaatc 791
Query: 1167 ctgcatttattagcatctctagtgtcatgga 1197
|||||||||||||||||||||||||||||||
Sbjct: 792 ctgcatttattagcatctctagtgtcatgga 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 422,739
Number of extensions: 9381
Number of successful extensions: 9381
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9380
Number of HSP's successfully gapped: 1
Length of query: 2998
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2980
Effective length of database: 8,109,745
Effective search space: 24167040100
Effective search space used: 24167040100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)