BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16653 (UTR included)
(1318 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 646 0.0
BF01049A2D11 113 7e-25
>BF14_729_C3
Length = 2041
Score = 646 bits (326), Expect = 0.0
Identities = 741/876 (84%), Gaps = 26/876 (2%)
Strand = Plus / Plus
Query: 53 gacatactgtttatagtaaacccatacgtgcggaaaggtatctcaacggtaactcacacc 112
|||||||||||||||| ||||||| || | |||| ||||| ||||| ||| |||||||||
Sbjct: 745 gacatactgtttataggaaacccacacatacggacaggtacctcaatggttactcacacc 804
Query: 113 accaccctatccagttagctaccgttggcaaatctttgttacagagagcccaacaccttt 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 accaccctatccagttagctaccgttggcaaatctttgttacagagagcccaacaccttt 864
Query: 173 gtgatgctgaccatctagaggccgaattggagcatgtaatacatgctcttaccaccaaca 232
||||||||||||| ||||||||||| || ||||||||| ||||||||| || | |||||
Sbjct: 865 gtgatgctgaccacctagaggccgagctgcagcatgtaaaacatgctctcactatcaaca 924
Query: 233 acc-gttcgttcttcgccaacatcgctagaaccacttgaagccacccacagttcagcaac 291
||| | ||| | |||||| |||||| |||||||| ||||||||||||||||| | | ||
Sbjct: 925 acctgcccgtgcctcgccagcatcgcaagaaccacctgaagccacccacagttgaacgac 984
Query: 292 aacttgcaatattaccatatgtaaagggagttactgacacatcttgaagaaggccacatc 351
||| ||| ||| |||||||||| |||||||||||||||| ||| | ||| |||||
Sbjct: 985 aacctgcgatactaccatatgtgaagggagttactgaca------gaata-ggcaacatc 1037
Query: 352 ttgaagaaggtttcgatcaagactatatacaaaagaaagtatacactagaaagtaagcca 411
|||||||||||||| || || ||||| |||||| | || ||||||| |||||
Sbjct: 1038 ttgaagaaggtttccattaaaactatttacaaacca-------cataagaaagtgagcca 1090
Query: 412 atttttgagtcctag----agtaccattcctttacaacaagcgggtgtatacaaacttta 467
||| ||||| || | |||| ||||||||||||||||||||||||||||||||| |
Sbjct: 1091 attcttgagaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaactcga 1150
Query: 468 tcgtaactttggcttgt-atacattggacagacaatgaggagcattggtacaggcgtgaa 526
|| ||| |||||||| ||||||||||||||| | ||||||||| |||||| | || ||
Sbjct: 1151 ctgtgactgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagttaa 1210
Query: 527 ggaacatgtatcagacattaagaagacgcgcgcgtcgaagtcagtagtgtgtgaacacat 586
|||||| | |||||||| || || | ||||||||||||||||| ||||||||||||||
Sbjct: 1211 ggaacacatctcagacatcaaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacac 1270
Query: 587 aatggacaaaccaggccattacattcggtttgataaaccagagatcctcgctcgtgaaga 646
|||||||||||||||||| |||||||| ||||||||||| | ||||||||||| |||||
Sbjct: 1271 aatggacaaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaaga 1330
Query: 647 caggtgcatacctagattaatccgtgaggctattgaaattaaaaaacatcccaatttcaa 706
|| || ||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1331 caagtatataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatttcaa 1390
Query: 707 tagagaagacggctggaatctatcccacacctgggaccccatacttaaatatataaaatc 766
||||||||| |||||||||||||| |||||||||||||| | |||||| ||||||||||
Sbjct: 1391 tagagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatc 1450
Query: 767 ccatgtccgtgaccacaccgcagaacctcgtgacaccgtaagcgcattctgacggcatcc 826
||||||||| |||||||||||| ||||| |||||||| ||||||||||| ||||||||
Sbjct: 1451 ccatgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatcc 1510
Query: 827 aaag-----cgccagaaaattaaagaatcattagctgtaggtgataagtaagaa-gacca 880
| || ||||| ||||| |||| | || |||| |||||| ||| || |||||
Sbjct: 1511 agagcggtacgccannnnattaagaaatcgatggcggtagatgataaataacaaggacca 1570
Query: 881 actgatagacattcacatctcgtctgcccgttatca 916
||||| ||||||||||| ||||||||||||| ||||
Sbjct: 1571 actgacagacattcacacctcgtctgcccgtgatca 1606
>BF01049A2D11
Length = 776
Score = 113 bits (57), Expect = 7e-25
Identities = 75/81 (92%)
Strand = Plus / Plus
Query: 561 tcgaagtcagtagtgtgtgaacacataatggacaaaccaggccattacattcggtttgat 620
|||||||||| ||| |||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 696 tcgaagtcagcagtatgtgaacacacaatggacaaaccaggccactacattcggtttgat 755
Query: 621 aaaccagagatcctcgctcgt 641
|||||| | ||||||||||||
Sbjct: 756 aaaccacaaatcctcgctcgt 776
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 163,141
Number of extensions: 3267
Number of successful extensions: 3267
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3265
Number of HSP's successfully gapped: 3
Length of query: 1318
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1301
Effective length of database: 8,119,229
Effective search space: 10563116929
Effective search space used: 10563116929
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)