BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16654 (UTR included)
(5977 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052A2H06 1580 0.0
BF01030B1C05 1403 0.0
>BF01052A2H06
Length = 797
Score = 1580 bits (797), Expect = 0.0
Identities = 797/797 (100%)
Strand = Plus / Plus
Query: 4752 tgtggcttatatttattacaatatgtagaacatttttttaaggatcctattgtggattat 4811
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgtggcttatatttattacaatatgtagaacatttttttaaggatcctattgtggattat 60
Query: 4812 tctctgcccataaaacagttagccaactggtttgatgaaattgtagtaacaagaaaacgt 4871
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctctgcccataaaacagttagccaactggtttgatgaaattgtagtaacaagaaaacgt 120
Query: 4872 gaagagatttcaatattgttaaagaatttaatgcacaaatataacccagactcgcattta 4931
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaagagatttcaatattgttaaagaatttaatgcacaaatataacccagactcgcattta 180
Query: 4932 gctttgcctgacattacattcccaacattacatggtaaattaatagaaaatgaagaacaa 4991
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctttgcctgacattacattcccaacattacatggtaaattaatagaaaatgaagaacaa 240
Query: 4992 gcagaggaaagaatggattgtgaaaagggtccttcaaataaagtacacaaaaacgacaag 5051
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcagaggaaagaatggattgtgaaaagggtccttcaaataaagtacacaaaaacgacaag 300
Query: 5052 gaatctgagggaccaactgttacatttctaaaacaaactccatccggtgaaattctagtt 5111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaatctgagggaccaactgttacatttctaaaacaaactccatccggtgaaattctagtt 360
Query: 5112 aaaagaaattttggtgaagagacaatactaagaaagacaataagactctctaatgattca 5171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaaagaaattttggtgaagagacaatactaagaaagacaataagactctctaatgattca 420
Query: 5172 gaaaatagatctgtagtgcaaatcaaacaggaatatggtaaaaaaggtgacaatgaaaat 5231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gaaaatagatctgtagtgcaaatcaaacaggaatatggtaaaaaaggtgacaatgaaaat 480
Query: 5232 caaatagttataccaattaaactgcactctagtgatttagttcaaaactctttaattgtg 5291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaatagttataccaattaaactgcactctagtgatttagttcaaaactctttaattgtg 540
Query: 5292 aataaaggtaaaaactttagtgataaaaaacatggtgtaaataatcagactgtatccagt 5351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aataaaggtaaaaactttagtgataaaaaacatggtgtaaataatcagactgtatccagt 600
Query: 5352 gttaactgtgtccgacaaaatgttagtgagagtgacagcaattcatttcttaaaggtaga 5411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gttaactgtgtccgacaaaatgttagtgagagtgacagcaattcatttcttaaaggtaga 660
Query: 5412 aggataaataaattagaggatgtggttaatgattcaaataagaagtttaaaaggaatgaa 5471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aggataaataaattagaggatgtggttaatgattcaaataagaagtttaaaaggaatgaa 720
Query: 5472 tgctaagattttgcctgtccatttaatcaatttattaaattatttttaatttaattatta 5531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgctaagattttgcctgtccatttaatcaatttattaaattatttttaatttaattatta 780
Query: 5532 caatgtgtatagttgtt 5548
|||||||||||||||||
Sbjct: 781 caatgtgtatagttgtt 797
>BF01030B1C05
Length = 724
Score = 1403 bits (708), Expect = 0.0
Identities = 720/724 (99%)
Strand = Plus / Plus
Query: 2012 catcacagcggcgatagtacaaaagaatccagtcaatgagaacgttaccacgccacaaca 2071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcacagcggcgatagtacaaaagaatccagtcaatgagaacgttaccacgccacaaca 60
Query: 2072 attccacacgcaaccatcgatgcgacaaaaccacaatccaggcgctcatagtgttcaaca 2131
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attccacacgcaaccgtcgatgcgacaaaaccacaatccaggcgctcatagtgttcaaca 120
Query: 2132 cataaactttagcccacagcatgggttccaacaacaaatagcctatgaacaccacatgcc 2191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cataaactttagcccacagcatgggttccaacaacaaatagcctatgaacaccacatgcc 180
Query: 2192 ccaaacgccccagtctcttaatcagttgctcttagaatctgaaaacccagatgagggatg 2251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaaacgccccagtctcttaatcagttgctcttagaatctgaaaacccagatgagggatg 240
Query: 2252 tcaatatgtaacattatccaatggccagagcatgtcagtagctgaatataaaagaatgca 2311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcaatatgtaacattatccaatggccagagcatgtcagtagctgaatataaaagaatgca 300
Query: 2312 gcatacatctcggactttaatacctcaccagcaacaagcaagggaaagtggtagacagac 2371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gcatacatctcggactttaatacctcaccagcaacaagcaagggaaagtggtagacagac 360
Query: 2372 attagtaagaagtaaagaacaaccacgaccagtgcaaagagtacatcccatgcaaacaca 2431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attagtaagaagtaaagaacaaccacgaccagtgcaaagagtacatcccatgcaaacaca 420
Query: 2432 acaggctaatcacatgaacgagtgcaatgattcagcaagtggaccttctgaacaatcatc 2491
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 421 acaggctaatcacatgaacgagtgcaatgattcagcgagtggaccttctgaacaatcatc 480
Query: 2492 agaattaccttcagctaaaatgttaatattcctgcaaagtggagaacagagacttattac 2551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agaattaccttcagctaaaatgttaatattcctgcaaagtggagaacagagacttattac 540
Query: 2552 ttttaccttacctaaagagagttgtacacttcaagaagttcttgaacaggtcaatgttcc 2611
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 541 ttttaccttacctaaagagagttgtacgcttcaagaagttcttgaacaggtcaatgttcc 600
Query: 2612 tttcacagaagatactcaaatacagtgtatgcagaataccagtactgaaatagattattt 2671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tttcacagaagatactcaaatacagtgtatgcagaataccagtactgaaatagattattt 660
Query: 2672 tgtaacagtaggttcaactatgagaattgaggaaatgttagaaaatcatccaatgttagt 2731
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 661 tgtaacagtaggttcaactatgagaattgaggagatgttagaaaatcatccaatgttagt 720
Query: 2732 tgga 2735
||||
Sbjct: 721 tgga 724
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 711,596
Number of extensions: 14513
Number of successful extensions: 14513
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14513
Number of HSP's successfully gapped: 2
Length of query: 5977
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5959
Effective length of database: 8,109,745
Effective search space: 48325970455
Effective search space used: 48325970455
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)