BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16685 (UTR included)
(1879 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_914_C1 1031 0.0
>BF14_914_C1
Length = 758
Score = 1031 bits (520), Expect = 0.0
Identities = 526/528 (99%)
Strand = Plus / Plus
Query: 1352 cagcggaccgcgcggggtggtgccctagcccgctgccgtctaaagcaaccaaaggagctg 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagcggaccgcgcggggtggtgccctagcccgctgccgtctaaagcaaccaaaggagctg 60
Query: 1412 gccagcaaaaaacttttagttgctagttcgcgtcctaaggcagtgttaagtctatagtaa 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccagcaaaaaacttttagttgctagttcgcgtcctaaggcagtgttaagtctatagtaa 120
Query: 1472 caggaaattacgcaatgctaaatgagagtaagagtcatggactttctttgtaagaacaaa 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caggaaattacgcaatgctaaatgagagtaagagtcatggactttctttgtaagaacaaa 180
Query: 1532 gttaagttattggtcctcaaatttaagtcaaaggacatgtgagaacgaagaatcatttca 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttaagttattggtcctcaaatttaagtcaaaggacatgtgagaacgaagaatcatttca 240
Query: 1592 gccgtcgcggaggaacggcaggtgttgttttgtggtacaacgtctcatggaagcaccttc 1651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gccgtcgcggaggaacggcaggtgttgttttgtggtacaacgtctcatggaagcaccttc 300
Query: 1652 aaagatgctggccagcacatgcgatacttggcttgcaggtacaagctgcgatgggaccgc 1711
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 aaagatgctggccagcacatgcgataccaggcttgcaggtacaagctgcgatgggaccgc 360
Query: 1712 tgttgaagtgaattgaactaaatatagttgctttcataaagtgtactatttgatagtgat 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgttgaagtgaattgaactaaatatagttgctttcataaagtgtactatttgatagtgat 420
Query: 1772 gtttgaactggaaaattaataatattataataattaagttttaaatttaaacatgaatta 1831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtttgaactggaaaattaataatattataataattaagttttaaatttaaacatgaatta 480
Query: 1832 acgtgattgtttgaaattagttttgcttcgtgtgtattatgtggatcg 1879
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acgtgattgtttgaaattagttttgcttcgtgtgtattatgtggatcg 528
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 215,313
Number of extensions: 4761
Number of successful extensions: 4761
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4761
Number of HSP's successfully gapped: 1
Length of query: 1879
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1862
Effective length of database: 8,119,229
Effective search space: 15118004398
Effective search space used: 15118004398
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)