BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16706 (UTR included)
(2641 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1D12 1528 0.0
>BF01058B1D12
Length = 830
Score = 1528 bits (771), Expect = 0.0
Identities = 811/823 (98%), Gaps = 1/823 (0%)
Strand = Plus / Plus
Query: 1379 aacccacgtgaccgatgtccacaaaaagaaatattacttcaacgtcaaagatctgatgct 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacccacgtgaccgatgtccacaaaaagaaatattacttcaacgtcaaagatctgatgct 60
Query: 1439 gccattcaagttgtccaaggacgagttcaagtgcgcgctctgtgacgtcatcttccccta 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccattcaagttgtccaaggacgagttcaagtgcgcgctctgtgacgtcatcttccccta 120
Query: 1499 cttccacgctctcaacaagcacatgaacgagcacttcagcaactacgtctgcgaaacctg 1558
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 121 cttccacgctctcaacaagcacatgaacgagcacttcagcaactacgtgtgcgaaacctg 180
Query: 1559 cgggctcgggtttgtggaccgcgggaggttcctgatgcatcagcagcggcacgaagaggg 1618
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 181 cgggctcgggtttgtggaccgcggcaggttcctgatgcatcagcagcggcacgaagaggg 240
Query: 1619 cgacttcccgtgcgaagtctgcgggaaggttttcaaagcccagtacaataaagaactgca 1678
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgacttcccgtgcgaagtctgcgggaaggttttcaaagcccagtacaataaagaactgca 300
Query: 1679 tattgatcgagttcacaaaaagaaaggtcgtgtgtattgcccgaaatgcgacgtgaggtt 1738
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatcgatcgagttcacaaaaagaaaggtcgtgtgtattgcccgaaatgcgacgtgaggtt 360
Query: 1739 aatgaactacccacaaaaactgaaacacctggtcgaagtccacggcgaggagcccctgtc 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aatgaactacccacaaaaactgaaacacctggtcgaagtccacggcgaggagcccctgtc 420
Query: 1799 cttcagctgtaacatgtgcgacaaagtctgcgagacgcgaagaaagctgacaatacacag 1858
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 cttcagctgtaacatgtgcgacaaagtctgcgagacgcgaagaaaactgacaatacacag 480
Query: 1859 acggaaagaacatttgaaagattacagatacgaatgccagtgttgcgggcagaaattttt 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 acggaaagaacatttgaaagattacagatacgaatgccagtgttgcgggcagaaattttt 540
Query: 1919 cacacgtttcgccctgaccaaccacatgccgacacacacaggcgagaggaactttaagtg 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cacacgtttcgccctgaccaaccacatgccgacacacacaggcgagaggaactttaagtg 600
Query: 1979 caaggtctgcgagaagacctaccctcgcctgaaaacattgaaagaccacctccgcatcca 2038
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 601 caaggtctgcgagaagacctaccctcgcctgaaaacgttgaaagaccacctccgcatcca 660
Query: 2039 caccaacgacaggagatacagatgccacatatgcggacaggccttcatacagaactgcag 2098
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 661 caccaacgacaggaggtacaggtgccacatatgcggacaggccttcatacagaactgcag 720
Query: 2099 cctcaaagggcacatgaagagccagcatcccgaatatagctagtttttatttacgaccag 2158
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 721 cctcaaagggcacatgaagagccagcatcccgaatacagctagtttttatttacgaccag 780
Query: 2159 gttatttttaggttataagaactggagttatttgcaataaagt 2201
|||| ||||| || |||||||||||||||||||||||||||||
Sbjct: 781 gtta-ttttatgtcataagaactggagttatttgcaataaagt 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 328,654
Number of extensions: 7102
Number of successful extensions: 7102
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7099
Number of HSP's successfully gapped: 1
Length of query: 2641
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2624
Effective length of database: 8,119,229
Effective search space: 21304856896
Effective search space used: 21304856896
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)