BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16708 (UTR included)
(1357 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2E01 821 0.0
BF14_2517_C1 434 e-121
>BF01055B2E01
Length = 834
Score = 821 bits (414), Expect = 0.0
Identities = 480/503 (95%)
Strand = Plus / Plus
Query: 1 taatatttttctgataaaaagcactctagacaactgttccatcgaactaatagcctcgtt 60
|||||||||||||||||||| ||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 332 taatatttttctgataaaaatcactctagataacagttccatcgaactaataacctcgtt 391
Query: 61 tcgatcgtacgttcggttgccgagatcatctccgcggatgaatgaactgtagtcgccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcgatcgtacgttcggttgccgagatcatctccgcggatgaatgaactgtagtcgccagt 451
Query: 121 atagcgttccactcgcttcacttaataaaatgattatatttttaggaaagttactcaaat 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 452 atagcgttccactcgcttcacttaataaaatgattctatttttaggaaagttacttaaat 511
Query: 181 taatttattgtatacaaatttacgattaatataatataatgagaatttgtatttaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 taatttattgtatacaaatttacgattaatataatataatgagaatttgtatttaaattt 571
Query: 241 cagtgggatctaccatcgtatacagataaactggagtacatctgtgcttcatgtagaata 300
|||||||||| | ||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 572 cagtgggatccatgatcagatacagataaactggagtacatctgtgcttcatgtagagta 631
Query: 301 attctgagacagtgcgttcggttcaaaaacaggttgcagatgtcggaacagagtttgaat 360
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 agtctgagacagtccgttcggttcaaaaacaggttgcagatgtcggaacagagtttgaat 691
Query: 361 tactatttcaataacggtaaacattaataacacttatttagcaccttactttacctgaca 420
|||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 692 tactgtctcaataacggtaaacattaataacacatatttagcaccttactttacctgaca 751
Query: 421 tcatgaactatagaatattttctgcggacagagattcacggatctagttaaaaagaacga 480
|||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 752 tcatgaactatagaatatattctgcgggcagnnnttcacggatctagttaaaaagaacga 811
Query: 481 acatggagttttgatgcacgatg 503
||||| |||||||||||||||||
Sbjct: 812 acatgaagttttgatgcacgatg 834
>BF14_2517_C1
Length = 1102
Score = 434 bits (219), Expect = e-121
Identities = 283/308 (91%), Gaps = 16/308 (5%)
Strand = Plus / Minus
Query: 996 gataacatattttcactttagtaacatggttatatcgtttgtatctcatttcacaaaact 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 gataacatattttcactttagtaacatggttatatcgtttgtatctcatttcacaaaact 1043
Query: 1056 gactgtaaacccacctcgcgcccttttaaaatccagtatcagactat------------- 1102
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gactgtaaacccacctcgcgcccttttaaaatccagtatcagactatccaatgatcatac 983
Query: 1103 ---tcagtgatcagactatccagcattcctaccatccagtagtcagactatctagcgttc 1159
||||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||
Sbjct: 982 tattcagtgatcagactatccagcgttcctaccatccagtgatcagactatccagcattc 923
Query: 1160 ctaccatccagtgaacagactatccagcgtccctaccgtccagtgatcagactatccagc 1219
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 922 ctaccatccagtgatcagactatccagcgttcctaccgtccagtgatcagactattcagc 863
Query: 1220 gttcctaccatccagtgatcagactatccagcgttcctaccatccagtgatcagactatc 1279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 gttcctaccatccagtgatcagactatccagcgttcctaccatccagtgatcagactatc 803
Query: 1280 cagcgttc 1287
||| ||||
Sbjct: 802 cagtgttc 795
Score = 256 bits (129), Expect = 8e-68
Identities = 156/165 (94%)
Strand = Plus / Minus
Query: 1168 cagtgaacagactatccagcgtccctaccgtccagtgatcagactatccagcgttcctac 1227
|||||| ||||||||||||||| |||||| |||||||||||||||||||||| |||||||
Sbjct: 978 cagtgatcagactatccagcgttcctaccatccagtgatcagactatccagcattcctac 919
Query: 1228 catccagtgatcagactatccagcgttcctaccatccagtgatcagactatccagcgttc 1287
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 918 catccagtgatcagactatccagcgttcctaccgtccagtgatcagactattcagcgttc 859
Query: 1288 ctaccatccagtagtcagactatccagcgttcctactatccagtg 1332
|||||||||||| |||||||||||||||||||||| ||||||||
Sbjct: 858 ctaccatccagtgatcagactatccagcgttcctaccatccagtg 814
Score = 167 bits (84), Expect = 6e-41
Identities = 117/128 (91%)
Strand = Plus / Minus
Query: 1205 atcagactatccagcgttcctaccatccagtgatcagactatccagcgttcctaccatcc 1264
||||||||||||| | || ||| || |||||||||||||||||||||||||||||||||
Sbjct: 1005 atcagactatccaatgatcatactattcagtgatcagactatccagcgttcctaccatcc 946
Query: 1265 agtgatcagactatccagcgttcctaccatccagtagtcagactatccagcgttcctact 1324
||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 945 agtgatcagactatccagcattcctaccatccagtgatcagactatccagcgttcctacc 886
Query: 1325 atccagtg 1332
|||||||
Sbjct: 885 gtccagtg 878
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 159,652
Number of extensions: 3434
Number of successful extensions: 3434
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3423
Number of HSP's successfully gapped: 6
Length of query: 1357
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1340
Effective length of database: 8,119,229
Effective search space: 10879766860
Effective search space used: 10879766860
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)