BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16717 (UTR included)
(2311 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2517_C1 1848 0.0
BF14_729_C2 68 7e-11
>BF14_2517_C1
Length = 1102
Score = 1848 bits (932), Expect = 0.0
Identities = 1078/1134 (95%), Gaps = 32/1134 (2%)
Strand = Plus / Plus
Query: 1036 acctgatggcaacacacaagaagaagatatacaccggatacggcgacaggataataccgt 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctgatggcaacacacaagaagaagatatacaccggatacggcgacaggataataccgt 60
Query: 1096 ttgaactcggcaagaacaaatacgactgccaaatatgcggctccagttacgagacattcg 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgaactcggcaagaacaaatacgactgccaaatatgcggctccagttacgagacattcg 120
Query: 1156 gtgctgtagagaggcacatgaatgttcactaccggaactacatctgcgatcagtgcggcg 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgctgtagagaggcacatgaatgttcactaccggaactacatctgcgatcagtgcggcg 180
Query: 1216 ttggtttcgtaacgaagaacagactgagggtgcacataagatcggcccacgtcaccggca 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggtttcgtaacgaagaacagactgagggtgcacataagatcggcccacgtcaccggca 240
Query: 1276 gctatccgtgcgacgtgtgcgacaaaatattccaagctcagcacaaatacaagaaccacg 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctatccgtgcgacgtgtgcgacaaaatattccaagctcagcacaaatacaagaaccacg 300
Query: 1336 ttgacgtcacccatagaatggtcaagaagaacaaatgcccgaagtgccccgagcgcttcg 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttgacgtcacccatagaatggtcaagaagaacaaatgcccgaagtgccccgagcgcttcg 360
Query: 1396 cggactatttccaccggcacaagcacatggtggacgcgcacggcgaaacgccgttacgat 1455
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 361 cggactatttccaccggcacaagcacatggtggacgcgcacggtgaaacgccgttgagat 420
Query: 1456 acaaatgcaacgtatgcgaagcgctgttcaaacgccgctacgccctctcctgccacacga 1515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acaaatgcaacgtatgcgaagcgctgttcaaacgccgctacgccctctcctgccacacga 480
Query: 1516 agagacggcacctggatatgagggacgtcaattgcgatgtctgcccctacaagtgctata 1575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agagacggcacctggatatgagggacgtcaattgcgatgtctgcccctacaagtgctata 540
Query: 1576 cgattaccgaactcaaagcccacatgataaaacacaacggccaaaggacttatgagtgta 1635
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cgataaccgaactcaaagcccacatgataaaacacaacggccaaaggacttatgagtgta 600
Query: 1636 atgtgtgcaaaaagtcctatgctagaaagaaaactctgaaggagcacatgaggatacata 1695
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 601 acgtgtgcaaaaagtcctatgctaggaagaaaactctgaaggagcacatgaggatacata 660
Query: 1696 ataacgacaggaggtacgtctgcgccgtctgcggacagggattcgtacagaactgcagtc 1755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ataacgacaggaggtacgtctgcgccgtctgcggacagggattcgtacagaactgcagtc 720
Query: 1756 tgaagggacatatgaagactcatcatacggaatatctgaataatctgccaagatagtcga 1815
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgaagggacatatgaagacccatcatacggaatatctgaataatctgccaagatagtcgg 780
Query: 1816 atcactgacagtgagaacactggatagtaggaacgctggatagtctgactactggatggt 1875
|||||||| |||||||||| ||||||||||||| ||||||||||
Sbjct: 781 atcactgaaagtgagaaca----------------ctggatagtctgatcactggatggt 824
Query: 1876 aggaacgctggatagtctgatcactggatggtaggaacgctggatagtctgatcactgga 1935
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 825 aggaacgctggatagtctgatcactggatggtaggaacgctgaatagtctgatcactgga 884
Query: 1936 tggtaggaacgctggatagtctgatcactggacggtagggacgctggatagtctgttcac 1995
||||||||||||||||||||||||||||||| |||||| | ||||||||||||| ||||
Sbjct: 885 cggtaggaacgctggatagtctgatcactggatggtaggaatgctggatagtctgatcac 944
Query: 1996 tggatggtaggaacgctagatagtctgactactggatggtaggaatgctggatagtctga 2055
||||||||||||||||| |||||||||| | ||| ||||| |||
Sbjct: 945 tggatggtaggaacgctggatagtctgatca----------------ctgaatagtatga 988
Query: 2056 tcactgaatagtctgatactggattttaaaagggcgcgaggtgggtttacagtcagtttt 2115
||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 989 tcattggatagtctgatactggattttaaaagggcgcgaggtgggtttacagtcagtttt 1048
Query: 2116 gtgaaatgagatacaaacgatataaccatgttactaaagtgaaaatatgttatc 2169
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1049 gtgaaatgagatacaaacgatataaccatgttactaaagtgaaaatatgttatc 1102
>BF14_729_C2
Length = 1289
Score = 67.9 bits (34), Expect = 7e-11
Identities = 65/74 (87%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 367 tcgtccgcccgtgatcacggttgctgacaaagtaaccgaaacgtaaaaagtatgtagtat 426
||||| ||||||||||||||||||||| |||||||||||||||| |||||||||| |
Sbjct: 530 tcgtctgcccgtgatcacggttgctga-aaagtaaccgaaacgtcgggagtatgtagttt 588
Query: 427 ttaaaaataataaa 440
|||| || ||||||
Sbjct: 589 ttaacaaaaataaa 602
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 230,898
Number of extensions: 4692
Number of successful extensions: 4692
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4680
Number of HSP's successfully gapped: 7
Length of query: 2311
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2294
Effective length of database: 8,119,229
Effective search space: 18625511326
Effective search space used: 18625511326
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)