BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16719 (UTR included)
(2617 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049B1D03 1483 0.0
>BF01049B1D03
Length = 790
Score = 1483 bits (748), Expect = 0.0
Identities = 769/776 (99%)
Strand = Plus / Plus
Query: 423 aaaatgtttgacattgttcagaatataattcgaaataaatagaaaattagatgaaaaata 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 aaaatgtttgacattgttcagaatataattcgaaataaatagaaaattagatgaaaaata 74
Query: 483 tattatttattaattaaaatggccgatttagacataccaaagaaagttaaaggcccttta 542
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 75 tattatttattaattaaaatggccgatttagacgtaccaaagaaagttaaaggcccttta 134
Query: 543 attgatccggcgctgtgtagatgctgtcggtctataaaacgatgccgtttgttgaccacg 602
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 attgatccggcactgtgtagatgctgtcggtctataaaacgatgccgtttgttgaccacg 194
Query: 603 gagtacgagtatatgggttctaaagagatttattccgatatgtttatggatgtatttggt 662
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gagtacgagtatatgggctctaaagagatttattccgatatgtttatggatgtatttggt 254
Query: 663 ttacttttgactcatctcgatggtgataacaaagattccgcaatatgtgccacctgtgtg 722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ttacttttgactcatctcgatggtgataacaaagattccgcaatatgtgccacctgtgtg 314
Query: 723 tcccgactgagagaagcgatagcattcaaacgacaggttcttcaatcggaacagatgttc 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tcccgactgagagaagcgatagcattcaaacgacaggttcttcaatcggaacagatgttc 374
Query: 783 atcgagtcgcttcagaatagagaggaaatagctaacattaagctcgagataaaagttgag 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 atcgagtcgcttcagaatagagaggaaatagctaacattaagctcgagataaaagttgag 434
Query: 843 ccgtccggtgatgagattgatgacaatcatgatgaagatataaatgtatcagagatgttg 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ccgtccggtgatgagattgatgacaatcatgatgaagatataaatgtatcagagatgttg 494
Query: 903 aatgatgttcaggagacaaagatattaggtgacggtaacagcgagatgttccatataaag 962
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 aatgatgttcaggagacaaagatattaggtgacggtaacagcgagatgttccatataaag 554
Query: 963 ttgaaatcgaataacaaaataagcaaactattaaggacgagtaagatgaaggcaaaggaa 1022
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 555 ttgaaatcgaataacaaaataagcaaactattaaggacgagtaagatgaagggaaaggaa 614
Query: 1023 aaaccatcgcggcaaaagaagaagctgtcacagaagcaaataattgatcacgacgtaatg 1082
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 615 aaaccatcgcggcaaaagaagaagctgtcacagaaacaaataattgatcacgacgtaatg 674
Query: 1083 gctctgaagaatacgatcgagatagtgaaatgttcgtatgtctgtcccttccacaaccgg 1142
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 675 gctctgaagaatacgatcgagatagtgaaatgttcatatgtctgtcccttccacaaccgg 734
Query: 1143 attagcttctactactgctactactgcaaagaccagttcacgaaccccatggaatt 1198
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 735 attagcttctactactgctactactgcaaagaccagtttacgaaccccatggaatt 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 341,237
Number of extensions: 12268
Number of successful extensions: 12268
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 12268
Number of HSP's successfully gapped: 1
Length of query: 2617
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2600
Effective length of database: 8,119,229
Effective search space: 21109995400
Effective search space used: 21109995400
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)