BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16727 (UTR included)
(2275 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1511_C1 1330 0.0
BF14_1194_C1 147 9e-35
>BF14_1511_C1
Length = 1217
Score = 1330 bits (671), Expect = 0.0
Identities = 699/710 (98%)
Strand = Plus / Plus
Query: 1136 agtcaaaggtggtaaggtgtatgctgtagccactgaggatatggatgctttgaccttcgg 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 agtcaaaggtggtaaggtgtatgctgtagccactgaggatatggatgctttgaccttcgg 567
Query: 1196 agcgaacgtgctgttgaggcacctcaccttctccgaggcgaggaagatgccagtacagga 1255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agcgaacgtgctgttgaggcacctcaccttctccgaggcgaggaagatgccagtacagga 627
Query: 1256 gttccacctggaccaggtgctgagaggattggaattggaacagacagagttcattgacct 1315
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gttccacctggaccaagtgctgagaggattggaattggaacagacagagttcattgacct 687
Query: 1316 ctgcattctgttgggttgtgattactgcggctccatcaaagggatcggaccgaaacgggc 1375
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 688 ctgcattctgttgggttgtgattactgcggctccatcaaagggataggaccgaaacgggc 747
Query: 1376 catcgaactcatcaagcaacaccgcagtatagaacaggtccttcacaatatcgacacaaa 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 catcgaactcatcaagcaacaccgcagtatagaacaggtccttcacaatatcgacacaaa 807
Query: 1436 gaagtacagtccgccggagaattgggaatatgaaaacgctcggagactgttccagcaacc 1495
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 808 gaagtacagtccgccggagaattgggaatacgaaaacgctcggagactgttccagcaacc 867
Query: 1496 agaagttaccgaggcgaaggatgtcgagttaaaatggtcggatcctgacgaggaaggtct 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 agaagttaccgaggcgaaggatgtcgagttaaaatggtcggatcctgacgaggaaggtct 927
Query: 1556 ggtgaagttcctctgtggagacaaacagttcaacgaggagcgcgtcaggaacggggccaa 1615
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ggtcaagttcctctgtggagacaaacagttcaacgaggagcgcgtcaggaacggggccaa 987
Query: 1616 gaaactcatgaaggcgcgcaccggaaccacgcagggcaggctggatggattcttcaaggt 1675
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 988 gaaactcatgaaggcgcgcaccggaaccacgcagggcaggctggacggattcttcaaggt 1047
Query: 1676 gttatcaacaacaccaaacccaaaaaggaaagcggaggaagataaaaagagtgccaacaa 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1048 gttatcaacaacaccaaacccaaaaaggaaagcggaggaagataaaaagagtgccaacaa 1107
Query: 1736 gaaagttaaaacagctggaagggggcggaaaccgaaataagactttaaccgacttgataa 1795
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1108 gaaagttaaaacagctggannnnngcggaaaccgaaataagactttaaccgacttgataa 1167
Query: 1796 taaatagtgttatgtttaaggtccattaaaacttattaatatgtttgttg 1845
||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1168 taaatagtgttatgtttaaggcccattaaaacttattaatatgtttgttg 1217
Score = 918 bits (463), Expect = 0.0
Identities = 501/512 (97%), Gaps = 5/512 (0%)
Strand = Plus / Plus
Query: 491 tttaaacataatgggtattttaggattatcaaagttgattgcagatattgctccaatggc 550
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttaaacaaaatgggtattttaggattatcaaagttgattgcagatattgctccaatggc 60
Query: 551 tgtaaaagaaacagagataaaaa-ttatttcggttggtaggaaagttgccatcgatgcat 609
||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 61 tgtaaaagaaacagagataaaaaattatttcggt----aggaaagttgccatcgacgcat 116
Query: 610 ctatgagcttgtatcaattcttaattgctgtaagaagtcaaggcgctcagctgacgtccg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ctatgagcttgtatcaattcttaattgctgtaagaagtcaaggcgctcagctgacgtccg 176
Query: 670 ttgatggtgaaacaacatcacacctaatgggtacattctacagaacgattcgtctcatag 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 ttgatggtgaaacaacatcacacctaatgggtacattctacagaacgattcgtctcatag 236
Query: 730 aagatggtatcaagcctgtgtatgtctttgatggtaaaccgcctgatatgaagtcacatc 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 aagatggtatcaagcctgtgtatgtctttgatggtaaaccgcctgatatgaagtcacatc 296
Query: 790 aattgaacaagagggccgagagacgagaggaagctgagaaagaactccagaaggctaccg 849
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 297 aattgaacaagagggccgagagacgagaggaagctgagaaagaactccaaaaggctaccg 356
Query: 850 aggctggtgatacggcatctattgacaagttcaaccgtcggttggtgaaggtgactcagc 909
|||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 357 aggctggtgacacggcatctatagacaagttcaaccgtcggttggtgaaggtgactcagc 416
Query: 910 aacacggtgccgaagctcggcagttgttgaagcttatggggatacccgtggtggaggctc 969
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aacacggcgccgaagctcggcagttgttgaagcttatggggatacccgtggtggaggctc 476
Query: 970 cgtgtgaagctgaggcacaatgcgctgaatta 1001
||||||||||||||||||||||||||||||||
Sbjct: 477 cgtgtgaagctgaggcacaatgcgctgaatta 508
>BF14_1194_C1
Length = 750
Score = 147 bits (74), Expect = 9e-35
Identities = 92/98 (93%), Gaps = 5/98 (5%)
Strand = Plus / Minus
Query: 1 atgtatttaaatagcaaataaattcaaggtcttaaacaaagacaaggtttcttttttatt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtaattaaatagcaaataaattcaaggtcttaaacaaagacaaggtttcttttttatt 62
Query: 61 gtattattaaatataacactttttgctatttaaaaaaa 98
| ||||||||||||||||||||||||||||||||
Sbjct: 61 g-----ttaaatataacactttttgctatttaaaaaaa 29
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,319
Number of extensions: 6177
Number of successful extensions: 6177
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6174
Number of HSP's successfully gapped: 3
Length of query: 2275
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2258
Effective length of database: 8,119,229
Effective search space: 18333219082
Effective search space used: 18333219082
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)