BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16742 (UTR included)
(1549 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A2A10 1562 0.0
>BF01058A2A10
Length = 831
Score = 1562 bits (788), Expect = 0.0
Identities = 812/820 (99%)
Strand = Plus / Plus
Query: 285 tttattactacttttatttgtaattaattaattttataagtcttaaatataactatggat 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tttattactacttttatttgtaattaattaattttataagtcttaaatataactatggat 71
Query: 345 tcttcttcaatcgtaagttttaataatgattctacataccaatctacgcttaaaggtgat 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcttcttcaatcgtaagttttaataatgattctacataccaatctacgcttaaaggtgat 131
Query: 405 agcaataacataagtgtacatgaattagctttacacgctatgagagacagatgcctgtta 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 agcaataacataagtgtacatgaattagctttacacgctatgagagacagatgcctgtta 191
Query: 465 cttcaacgcaggataaatactttagaaacagataacatgcgcttaaagttagatatatcg 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cttcaacgcaggataaatactttagaaacagataacatgcgcttaaagttagatatatcg 251
Query: 525 aaatcaactgaaaaggctccttatatacctttgcaacaggatgaaaaatcagttctgcaa 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaatcaactgaaaaggctccttatatacctttgcaacaggatgaaaaatcagttctgcaa 311
Query: 585 caaaaaattgcagaactaaataagcaaaagtcacaacttctacaccatgtattcatggta 644
||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 312 caaaaaattgcagaattaaataagcaaaagtcgcaacttctacaccatgtattcatggta 371
Query: 645 tcatgtgaaaacaaaaacttatggagcaaactttcattattaaagaatccagaaagaaat 704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcatgtgaaaacaaaaacttatggagcaaactttcattattaaagaatccagaaagaaat 431
Query: 705 gcaattgaacgccccagaaatccccttgttcgcaccaacacctacatacacagtacacca 764
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 432 gcaattgaacgccccagaaatccccttgttcgcaccaacacctacatacacagcacacca 491
Query: 765 aaatgtcacaaccagtatcaagaaaaatattccgattcaagcttggaagaaatatcacta 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaatgtcacaaccagtatcaagaaaaatattccgattcaagcttggaagaaatatcacta 551
Query: 825 aaattaattaatagttacatacaagagaagtctcaacttgtagaacaatatgaacaaatg 884
|||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 552 aaattaatcaatagttacattcaagagaagtctcaactcgtagaacaatatgaacaaatg 611
Query: 885 gctcaacttcaagacatagatgatgacatattgaatgttgattcaattggtttcacttac 944
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 612 gctcaacttcaagacatagatgatgatatattgaatgttgattcaattggtttcacttac 671
Query: 945 attgaagatccagcgatggactcacttacagaaatacgaaatcacacagataagttacag 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 attgaagatccagcgatggactcacttacagaaatacgaaatcacacagataagttacag 731
Query: 1005 cagctcaagaaagaattggctcaacaagaaaaagacttgcaattagttttatcaagatta 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 cagctcaagaaagaattggctcaacaagaaaaagacttgcaattagttttatcaagatta 791
Query: 1065 gagactattgtaacaaatggctacaaatgtgcatcttgcc 1104
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 792 gagactattgtaactaatggctacaaatgtgcatcttgcc 831
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,036
Number of extensions: 4206
Number of successful extensions: 4206
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4206
Number of HSP's successfully gapped: 1
Length of query: 1549
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1532
Effective length of database: 8,119,229
Effective search space: 12438658828
Effective search space used: 12438658828
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)