BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16755 (UTR included)
(4342 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C2 119 4e-26
BF01012A1E04 115 6e-25
BF01052B1F12 111 1e-23
BF01012A1B09 107 1e-22
BF01025B2E05 105 6e-22
BF01056A1B08 100 4e-20
BF01011A1H06 98 1e-19
BF01025A1D01 92 9e-18
BF01017A2H11 92 9e-18
BF01024A1H07 84 2e-15
BF14_729_C3 82 9e-15
BF01049B2H03 78 1e-13
BF01019B1G10 78 1e-13
BF01058B2C06 74 2e-12
BF01047B2B04 72 8e-12
BF01014A1H02 72 8e-12
>BF14_729_C2
Length = 1289
Score = 119 bits (60), Expect = 4e-26
Identities = 100/112 (89%), Gaps = 1/112 (0%)
Strand = Plus / Plus
Query: 318 tctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta-tt 376
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 528 tctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagtatgtagtt 587
Query: 377 aaaaaaaaaaattaagcacccgtagtatatccgaataatattagtttcattt 428
|| |||||| |||||| |||||| |||||||||||| |||||||||||
Sbjct: 588 tttaacaaaaataaagcacgcgtagtttatccgaataattctagtttcattt 639
Score = 89.7 bits (45), Expect = 3e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 200 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgg 259
||||||||||||||||||||||| ||||||| ||||||||||||||||| ||| |||||
Sbjct: 677 ttaatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgg 618
Query: 260 atatactac 268
||| |||||
Sbjct: 617 ataaactac 609
>BF01012A1E04
Length = 841
Score = 115 bits (58), Expect = 6e-25
Identities = 65/66 (98%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 204 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatat-ttttcggata 262
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 263 tactac 268
||||||
Sbjct: 558 tactac 553
>BF01052B1F12
Length = 785
Score = 111 bits (56), Expect = 1e-23
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 203 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcggata 262
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggata 356
Query: 263 tact 266
||||
Sbjct: 357 tact 360
Score = 81.8 bits (41), Expect = 9e-15
Identities = 98/116 (84%), Gaps = 2/116 (1%)
Strand = Plus / Minus
Query: 315 acatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta 374
|||||||| ||||||||||||||||||||||||||| |||| ||| |||||||||||||
Sbjct: 447 acatctcgtctgcccgtgatcacggttgctgaaaagtcaccgtaacatcgggagtatgta 388
Query: 375 --ttaaaaaaaaaaattaagcacccgtagtatatccgaataatattagtttcattt 428
|| | |||||| || || || |||||||||||| ||||||||||||||||
Sbjct: 387 gcttccttacaaaaataaaagacgcgaagtatatccgaaaaatattagtttcattt 332
>BF01012A1B09
Length = 841
Score = 107 bits (54), Expect = 1e-22
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 203 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcggata 262
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
Query: 263 tactac 268
|||||
Sbjct: 765 cactac 770
Score = 73.8 bits (37), Expect = 2e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 326 gcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta 374
|||||||||||||| |||||||||| |||||||||||||||| ||||||
Sbjct: 841 gcccgtgatcacggctgctgaaaagtaaccgaaacgtcgggattatgta 793
>BF01025B2E05
Length = 759
Score = 105 bits (53), Expect = 6e-22
Identities = 63/65 (96%), Gaps = 1/65 (1%)
Strand = Plus / Minus
Query: 200 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactaatat-ttttcg 258
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 122 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtatattttcg 63
Query: 259 gatat 263
|||||
Sbjct: 62 gatat 58
>BF01056A1B08
Length = 761
Score = 99.6 bits (50), Expect = 4e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 203 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 252
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatat 145
Score = 75.8 bits (38), Expect = 5e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 314 cacatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcggga 367
||||||||| | |||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 245 cacatctcgtccgcccgtgaccacggttcctgaaaagcaaccgaaacgtcggga 192
>BF01011A1H06
Length = 739
Score = 97.6 bits (49), Expect = 1e-19
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 314 cacatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgt 373
||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 456 cacatctcgtctgcccgtgatcacggttactgaaaagtaaccgaaacgtcgggagtatgt 515
Query: 374 a 374
|
Sbjct: 516 a 516
Score = 97.6 bits (49), Expect = 1e-19
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 200 ttaatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgg 259
|||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||||||||
Sbjct: 609 ttaatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgg 550
Query: 260 atatactac 268
||| |||||
Sbjct: 549 ataaactac 541
>BF01025A1D01
Length = 764
Score = 91.7 bits (46), Expect = 9e-18
Identities = 96/112 (85%), Gaps = 3/112 (2%)
Strand = Plus / Minus
Query: 317 atctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgtatt 376
|||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||| |
Sbjct: 485 atctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcgggagcctgtaat 426
Query: 377 aaaaaaaaaaattaagcacccgtagtatatccgaataatattagtttcattt 428
|| |||| | |||||| | ||||||||||| ||||||||||||||||
Sbjct: 425 tttaacaaaattaaagcacgc---gtatatccgaaaaatattagtttcattt 377
Score = 71.9 bits (36), Expect = 8e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 230 attcatttaaatgaaactaatatttttcggatatac 265
||||||||||||||||||||||||||||||||||||
Sbjct: 369 attcatttaaatgaaactaatatttttcggatatac 404
>BF01017A2H11
Length = 713
Score = 91.7 bits (46), Expect = 9e-18
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 314 cacatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtat 371
||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 29 cacatctcgtctgcccgtgatcacggttgctgaaaagtaaccaaaacgtcgggagtat 86
>BF01024A1H07
Length = 726
Score = 83.8 bits (42), Expect = 2e-15
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 315 acatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta 374
|||||||| ||||||||||||||||||||||||||| |||||||||||| | | ||||||
Sbjct: 644 acatctcgtctgcccgtgatcacggttgctgaaaagtaaccgaaacgtcngnattatgta 703
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 9e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 314 cacatctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgt 373
|||| |||| |||||||||||||||||||||| |||| |||||||||||||||| |||||
Sbjct: 1584 cacacctcgtctgcccgtgatcacggttgctgcaaagtaaccgaaacgtcgggattatgt 1643
Query: 374 a 374
|
Sbjct: 1644 a 1644
Score = 71.9 bits (36), Expect = 8e-12
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Minus
Query: 203 atgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcggata 262
||||||||||||| |||||||||| ||||||||||||||| ||| |||| ||||||||
Sbjct: 1729 atgagatctaagattttcgcgagt---attcatttaaatgaagctagtattattcggata 1673
Query: 263 tactac 268
||||||
Sbjct: 1672 tactac 1667
>BF01049B2H03
Length = 832
Score = 77.8 bits (39), Expect = 1e-13
Identities = 56/61 (91%), Gaps = 3/61 (4%)
Strand = Plus / Minus
Query: 201 taatgagatctaagactttcgcgagttttattcatttaaatgaaactaatatttttcgga 260
||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 354 taatgagatctaagattttagcgagt---attcatttaaatgaaactaatatttttcgga 298
Query: 261 t 261
|
Sbjct: 297 t 297
>BF01019B1G10
Length = 488
Score = 77.8 bits (39), Expect = 1e-13
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 324 ctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta 374
|||||||||||||||||| |||||||| |||||||||||||||| ||||||
Sbjct: 397 ctgcccgtgatcacggttactgaaaaggaaccgaaacgtcgggattatgta 347
>BF01058B2C06
Length = 772
Score = 73.8 bits (37), Expect = 2e-12
Identities = 97/113 (85%), Gaps = 3/113 (2%)
Strand = Plus / Minus
Query: 317 atctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgta-t 375
|||||| ||| |||||||||||| ||| | |||| |||||||||||||||| |||||| |
Sbjct: 483 atctcgtctggccgtgatcacggctgcagcaaagtaaccgaaacgtcgggaatatgtagt 424
Query: 376 taaaaaaaaaaattaagcacccgtagtatatccgaataatattagtttcattt 428
| || ||||||| |||||| ||||||| ||| ||| ||||||||||||||||
Sbjct: 423 tttaacaaaaaataaagcacgcgtagta-atcagaa-aatattagtttcattt 373
>BF01047B2B04
Length = 762
Score = 71.9 bits (36), Expect = 8e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 316 catctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtat 371
||||||||||| |||||||||||||||||| ||| || |||||||||||||||||
Sbjct: 221 catctcgcctgaccgtgatcacggttgctgcgaagtaaacgaaacgtcgggagtat 166
>BF01014A1H02
Length = 787
Score = 71.9 bits (36), Expect = 8e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 316 catctcgcctgcccgtgatcacggttgctgaaaagcaaccgaaacgtcgggagtatgtat 375
||||||| |||||||||||||||||||||| |||| ||| ||||||||||| | ||||
Sbjct: 252 catctcgtctgcccgtgatcacggttgctgtaaaggaacggaaacgtcggggttgtgtag 311
Query: 376 taaaaaaa 383
||||||||
Sbjct: 312 taaaaaaa 319
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 445,326
Number of extensions: 10021
Number of successful extensions: 10021
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 10016
Number of HSP's successfully gapped: 23
Length of query: 4342
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4324
Effective length of database: 8,109,745
Effective search space: 35066537380
Effective search space used: 35066537380
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)