BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16786 (UTR included)
(1480 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A1C05 973 0.0
>BF01029A1C05
Length = 782
Score = 973 bits (491), Expect = 0.0
Identities = 516/523 (98%), Gaps = 1/523 (0%)
Strand = Plus / Minus
Query: 888 gatggcaatgatttaggttttgaaaagtgttaccaacaagctgtgagaagtataaaagga 947
|||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct: 522 gatggcaatgatttaggttttgaaaactgttaccaacaagctgtgagaagtatagaagga 463
Query: 948 tttttggaacaactagcaaatggttctgtttaatatattatttgatatatacacatatat 1007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tttttggaacaactagcaaatggttctgtttaatatattatttgatatatacacatatat 403
Query: 1008 attgaatataaattacctaactgtaatattaaaacagttttatagtgaggtgccttggaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 attgaatataaattacctaactgtaatattaaaacagttttatagtgaggtgccttggaa 343
Query: 1068 attttaagttattttctattcaaaggagtacttaatatgttaaaacacgatttttatatt 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 attttaagttattttctattcaaaggagtacttaatatgttaaaacacgatttttatatt 283
Query: 1128 gtatacatatttaaataaatatttatttgtagtagtaatctcggacttcataaatctcgt 1187
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 282 gtatacatatttaaataaatatttatttgtaatagtaatctcggacttcataaatctcgt 223
Query: 1188 ctaacttataaattacgttttaattaatacatatgagtttggttttgcggtaacatgtta 1247
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 222 ctaacttataaattacgttttaattaatacatatgagtttggttttgcggtaaaatgtta 163
Query: 1248 tacctaaaccgatataattagatcgtgttactgttaacgccacgagagagtgtgttgtaa 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tacctaaaccgatataattagatcgtgttactgttaacgccacgagagagtgtgttgtaa 103
Query: 1308 actgatatctatataatacttaacgtaataatgcaatcaatgtaacaacgtgtacttttt 1367
||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 102 acttatatctatataatacttaacgtaatactgcaatcaatgtaacaacgtgtactttt- 44
Query: 1368 ttttattattttatgccacggtttcaagcatgcactttaggtt 1410
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 ttttattattttatgccacggtttcaagcatgcactttaggtt 1
Score = 305 bits (154), Expect = 1e-82
Identities = 162/166 (97%)
Strand = Plus / Minus
Query: 723 cagatagtaactgaagatttcaaccattatgactatatatttggaatggatgacatgaat 782
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 778 cagatagtaactgaagatttcaaccattatgactatatannnngaatggatgacatgaat 719
Query: 783 ataaaggaccttcatgagcttgctccacccgggagcagggccaggatactcctgttaggg 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ataaaggaccttcatgagcttgctccacccgggagcagggccaggatactcctgttaggg 659
Query: 843 gattttgatccggatggtgaaaggattattagagacccttattttg 888
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gattttgatccggatggtgaaaggattattagagacccttattttg 613
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 237,709
Number of extensions: 5821
Number of successful extensions: 5821
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5819
Number of HSP's successfully gapped: 2
Length of query: 1480
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1463
Effective length of database: 8,119,229
Effective search space: 11878432027
Effective search space used: 11878432027
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)