BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16790 (UTR included)
(2554 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_651_C1 1033 0.0
>BF14_651_C1
Length = 1472
Score = 1033 bits (521), Expect = 0.0
Identities = 538/541 (99%), Gaps = 2/541 (0%)
Strand = Plus / Plus
Query: 2014 agcagaccaatgcggcaagcgaagacgcttccaaggtatgaaataccaagtagccttaat 2073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agcagaccaatgcggcaagcgaagacgcttccaaggtatgaaataccaagtagccttaat 60
Query: 2074 gagatattccaaaaattatttactttataatcagataatatttatatatggtaatacttt 2133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagatattccaaaaattatttactttataatcagataatatttatatatggtaatacttt 120
Query: 2134 tacatcgtacgcataaagattaatattgattgtacacttttaatcatagtttttataaat 2193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacatcgtacgcataaagattaatattgattgtacacttttaatcatagtttttataaat 180
Query: 2194 tagagatataaattatttatattatattaaatagagttatatgtatacttagttgatttg 2253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagagatataaattatttatattatattaaatagagttatatgtatacttagttgatttg 240
Query: 2254 gtcgtgtaggctgcgttgcttgttaggtgttaactggtgatagataggttattgacaaat 2313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtcgtgtaggctgcgttgcttgttaggtgttaactggtgatagataggttattgacaaat 300
Query: 2314 aaatatatatcacatatttaaacagagcataatctattttacatttaatattgaaaaaga 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaatatatatcacatatttaaacagagcataatctattttacatttaatattgaaaaaga 360
Query: 2374 tataaaatgttaatatatatgattttttttttattaatcagtaagcggcatacagatgtt 2433
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 361 tataaaatgttaatatatatga-tttttttttattaatcagtaagcggcatacagatgtt 419
Query: 2434 cttattaacaaattgtcaattatggttatatgattgacaaaaagatgctgtgtttccatc 2493
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 420 cttattaacaaattgtcaattatggttatatgattgacaaaaagatgctgtgttaccatc 479
Query: 2494 gttcatcacaatataatataaaaaaaaaatgccaaaaaatatgtcatacatattgtatat 2553
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gttcatcacaatataatat-aaaaaaaaatgccaaaaaatatgtcatacatattgtatat 538
Query: 2554 t 2554
|
Sbjct: 539 t 539
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 384,839
Number of extensions: 10470
Number of successful extensions: 10470
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10468
Number of HSP's successfully gapped: 1
Length of query: 2554
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2537
Effective length of database: 8,119,229
Effective search space: 20598483973
Effective search space used: 20598483973
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)