BLASTN 2.2.24 [Aug-08-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= DPGLEAN16792 (UTR included) (3418 letters) Database: est 9484 sequences; 8,280,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BF01055B2F03 174 6e-43 BF01029A1A09 115 5e-25
>BF01055B2F03 Length = 776 Score = 174 bits (88), Expect = 6e-43 Identities = 145/164 (88%) Strand = Plus / Plus Query: 289 agactacgtgattgccccgatgttaggatagcaatgccattccatagctcgtgtggtatc 348 ||||||| |||||||||||| || || ||||| ||||||||||||||| ||||||| || Sbjct: 561 agactacttgattgccccgacgtaagcatagccatgccattccatagcgtgtgtggtgtc 620 Query: 349 aggaatcttctggttcacacggctcggtgttggttccgcggagtcagcggcgtcactcgt 408 |||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 621 aggagtctcctggttcacgcggcgcggtgttggttccgcggagtcagcggcgtcactcgt 680 Query: 409 tatatgatattttgtccatacaacgacgtgtcccggcgacgttc 452 ||||||||||| | |||||||| ||| || |||||||| |||| Sbjct: 681 tatatgatattctatccatacagcgatgttccccggcgatgttc 724 >BF01029A1A09 Length = 732 Score = 115 bits (58), Expect = 5e-25 Identities = 86/95 (90%), Gaps = 4/95 (4%) Strand = Plus / Minus Query: 205 aaccagaggttccaggaaaactacgaaacttacttatatgtatattaaaataaaaata-- 262 |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||| | Sbjct: 98 aaccggaggttccaggaaaactacgaaacatacttatatgtatattataataaaaaaatt 39 Query: 263 --acattaaaacttataacctatacctaagactac 295 | ||||||||||||||||||||||||||||||| Sbjct: 38 acatattaaaacttataacctatacctaagactac 4 Database: est Posted date: Jul 14, 2011 2:25 PM Number of letters in database: 8,280,457 Number of sequences in database: 9484 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 9484 Number of Hits to DB: 320,680 Number of extensions: 6245 Number of successful extensions: 6245 Number of sequences better than 1.0e-10: 2 Number of HSP's gapped: 6245 Number of HSP's successfully gapped: 2 Length of query: 3418 Length of database: 8,280,457 Length adjustment: 18 Effective length of query: 3400 Effective length of database: 8,109,745 Effective search space: 27573133000 Effective search space used: 27573133000 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 50 (99.1 bits) S1: 12 (24.3 bits) S2: 35 (69.9 bits)