BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16796 (UTR included)
(4675 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1B10 1473 0.0
BF14_335_C2 101 1e-20
BF01016B1E06 82 9e-15
BF01043B1E03 76 6e-13
>BF01027A1B10
Length = 763
Score = 1473 bits (743), Expect = 0.0
Identities = 758/763 (99%)
Strand = Plus / Plus
Query: 3059 gcccagtatgggcgcacttgtcgcgtccctacaaggaaccaaactggatacaggtatacc 3118
||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcccagtatggtcgcgcttgttgcgtccctacaaggaaccaaactggatacaggtatacc 60
Query: 3119 tctgcagaccgtatccgaatattcagcttactgggaacaggctcgcactctgtacgggcc 3178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctgcagaccgtatccgaatattcagcttactgggaacaggctcgcactctgtacgggcc 120
Query: 3179 gttcgagtgcaccgctaccatgaaatcaggaaatgctgatgtttacatcaacgagattcc 3238
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 gttcgagtgcaccgctaccatgaaatcagggaatgctgatgtttacatcaacgagattcc 180
Query: 3239 cggcggtcaatacacgaacctgcagttccaggccttctcgttgggcctgggaagtcaatt 3298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 cggcggtcaatacacgaacctgcagttccaggccttctcgttgggcctgggaagtcaatt 240
Query: 3299 cgaggaagtgaagaaggcctatagggaagcgaatctgctcctgggggacattattaaagt 3358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgaggaagtgaagaaggcctatagggaagcgaatctgctcctgggggacattattaaagt 300
Query: 3359 gactccatcatcgaaggtagtgggtgatctggctcaattcatggttcagaacaaactgac 3418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gactccatcatcgaaggtagtgggtgatctggctcaattcatggttcagaacaaactgac 360
Query: 3419 cgctgacgacatcagggcgagggctgaagaattatccttccccaaatcagtggtcgagtt 3478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgctgacgacatcagggcgagggctgaagaattatccttccccaaatcagtggtcgagtt 420
Query: 3479 cttccaaggagccattggcatcccttacggaggtttcccagaacccttaaggtccaaaat 3538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttccaaggagccattggcatcccttacggaggtttcccagaacccttaaggtccaaaat 480
Query: 3539 cctcaaggacatgccaaggatagaaggccgcccgggacaggaactgccgccgctagattt 3598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cctcaaggacatgccaaggatagaaggccgcccgggacaggaactgccgccgctagattt 540
Query: 3599 tgacaaactaaaggaggagttaaaggagtcttaccctgagatcacagaccaggacgtgat 3658
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgacaaactaaaagaggagttaaaggagtcttaccctgagatcacagaccaggacgtgat 600
Query: 3659 gtcatcggcgatgtatcctcaagtggcgtcagacttcttccgtatccgggataagtacgg 3718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcatcggcgatgtatcctcaagtggcgtcagacttcttccgtatccgggataagtacgg 660
Query: 3719 cccagtcaaacacctcgacacgaagactttcctcgttggtccggcggtcggtgaaaccat 3778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cccagtcaaacacctcgacacgaagactttcctcgttggtccggcggtcggtgaaaccat 720
Query: 3779 tgaagttaaaatcgagagaggcaaaacactggatataaaaaca 3821
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgaagttaaaatcgagagaggcaaaacactggatataaaaaca 763
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 1e-20
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Minus
Query: 1928 cgaacgtacttcgaaggcagccctagtgggttcgtctcaaatttggttaggtagagagag 1987
|||||||||||||||| |||| ||||| ||||||| |||||||||||||| |||||||
Sbjct: 1029 cgaacgtacttcgaagacagctctagtaggttcgtttcaaatttggttag---gagagag 973
Query: 1988 gagcttggacggtggaggtga 2008
|||||||||||||||||||||
Sbjct: 972 gagcttggacggtggaggtga 952
>BF01016B1E06
Length = 606
Score = 81.8 bits (41), Expect = 9e-15
Identities = 44/45 (97%)
Strand = Plus / Minus
Query: 1964 tcaaatttggttaggtagagagaggagcttggacggtggaggtga 2008
||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 tcaaatttggttaggtagagagaggagattggacggtggaggtga 277
>BF01043B1E03
Length = 830
Score = 75.8 bits (38), Expect = 6e-13
Identities = 70/80 (87%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 1929 gaacgtacttcgaaggcagccctagtgggttcgtctcaaatttggttaggtagagagagg 1988
||||||||| | ||||||| ||||| ||| || |||||||||||||||||||||||||
Sbjct: 290 gaacgtactgcaaaggcaggcctag---gtttgtttcaaatttggttaggtagagagagg 346
Query: 1989 agcttggacggtggaggtga 2008
| ||||||| ||||||||||
Sbjct: 347 accttggacagtggaggtga 366
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 459,555
Number of extensions: 9463
Number of successful extensions: 9463
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 9462
Number of HSP's successfully gapped: 4
Length of query: 4675
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4657
Effective length of database: 8,109,745
Effective search space: 37767082465
Effective search space used: 37767082465
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)