BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16808 (UTR included)
(1864 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3053_C1 1568 0.0
>BF14_3053_C1
Length = 807
Score = 1568 bits (791), Expect = 0.0
Identities = 803/807 (99%)
Strand = Plus / Plus
Query: 425 gcagttcgttttctgttgtgttttgctacatctccgcattctccggtaatagcgttagta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagttcgttttctgttgtgttttgctacatctccgcattctccggtaatagcgttagta 60
Query: 485 attcaaagcatacaacatgtctaataaaagaaacaaggaaatgcaagacccagaaagtga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attcaaagcatacaacatgtctaataaaagaaacaaggaaatgcaagacccagaaagtga 120
Query: 545 aagtgaagaagaacaggaatcaggcagcgataaggattcagactttgattccgatggaaa 604
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 aagtgaagaagaacaggaatcaggcagtgataaggattcagactttgattccgatggaaa 180
Query: 605 ctttgtcggcgacaaagaattacaagctgatttcgaaggaagaaacccggaggactgtga 664
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 181 ctttgtcggcgacaaagaattacaagctgattttgaaggaagaaacccagaggactgtga 240
Query: 665 ttttcatggaatcaagcaactattgagacagctgtttttaaaatcaaatgtggatctagg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttttcatggaatcaagcaactattgagacagctgtttttaaaatcaaatgtggatctagg 300
Query: 725 cggcctggcacagattattatatctcaaaactatattggtagtgttgtgaagcaatgcct 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggcctggcacagattattatatctcaaaactatattggtagtgttgtgaagcaatgcct 360
Query: 785 ggacgacgggcttgaggatgatgatgaggacgacggcagtgatggagtatttggtatcac 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggacgacgggcttgaggatgatgatgaggacgacggcagtgatggagtatttggtatcac 420
Query: 845 aacagttataaatataacaaagagaaaagacgaacaaagcatcgcgcaaatcagaactct 904
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacagttataaatataacaaagagaaaagacgaacaaagcatcgcgcaaatcagaactct 480
Query: 905 gctgacatctctggcaaatgacaacgccgacgatcaaacaaaggctttagtaaataaaat 964
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgacatctctggcaaatgacaacgccgacgatcaaacaaaggctttagtaaataaaat 540
Query: 965 tctatccgataattccaaccatgtgggtctagttataaatgagaggattttaaacattcc 1024
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctatccgatgattccaaccatgtgggtctagttataaatgagaggattttaaacattcc 600
Query: 1025 agcggctataagtgttccacttttctcgtcacttcagaatgaattagacaaggcgctgaa 1084
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agcggctataagtgttccacttttctcgtcacttcagaatgaattagacaaggcgctgaa 660
Query: 1085 gaaaaacatgccatatgtattccaataccttgtatggatttgtaagacatacaaaacggg 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaaaaacatgccatatgtattccaataccttgtatggatttgtaagacatacaaaacggg 720
Query: 1145 agatgatgaatccgaagttctgttcgctaaccaagaagaaaagccgctagtcgatgaagc 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agatgatgaatccgaagttctgttcgctaaccaagaagaaaagccgctagtcgatgaagc 780
Query: 1205 ggtagccagttttgatgtggatgtgac 1231
|||||||||||||||||||||||||||
Sbjct: 781 ggtagccagttttgatgtggatgtgac 807
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,759
Number of extensions: 5430
Number of successful extensions: 5430
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5430
Number of HSP's successfully gapped: 1
Length of query: 1864
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1847
Effective length of database: 8,119,229
Effective search space: 14996215963
Effective search space used: 14996215963
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)