BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16815 (UTR included)
(1543 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01024A2A12 1152 0.0
>BF01024A2A12
Length = 762
Score = 1152 bits (581), Expect = 0.0
Identities = 710/752 (94%), Gaps = 17/752 (2%)
Strand = Plus / Minus
Query: 787 tattagatatcgaggacctagaaatatgtaaaaagtctggtcgaccgtgtgcggagaata 846
|||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 758 tattagatattgaggacctagaaatatgtaaaaagtctggtcgaccgtgtgcgaagaata 699
Query: 847 gttgtgacgaatctgattggtgtttattatctaaaaacgaacttaatggaaaactactgc 906
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 698 gttgtgacgaatctgattggtgtttattatctaaaaacgaacttaatggaaaactaatgc 639
Query: 907 acattatattaaatgataacagggactggttcaaagcgacgtgtatatctgacatatttg 966
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acattatattaaatgattacagggactggttcaaagcgacgtgtatatctgacatatttg 579
Query: 967 aaatttaccaaaaatggggaactgagtcttatatgcttctggctggaaatacagggaaag 1026
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aaattttccaaaaatggggaactgagtcttatatgcttctggctggaaatacagggaaag 519
Query: 1027 gtaaccattataattaaactacgttaaagtttcattgattatttggaattagt------- 1079
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gtaaatattataattaaactacgttaaagtttcattgattatttggaattagtttttaac 459
Query: 1080 -----acaaaaagataacattatattttctatttttcagaatgcaacagtcgcttttaat 1134
| |||| |||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 458 ttcgtataaaacgataacattatattttctgtttt-cagaatgcaacagtcgcttttaat 400
Query: 1135 cttatgctgaagaattttcacctcgattttaaatccgacattttcatactttttgagact 1194
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 399 cttatgctgaagaattttcacctcgattttaaatccgacatttttataatttttgagact 340
Query: 1195 gttggtgcacaacttactatatgtaaataattttgatagattacaaaaacatttctcttc 1254
||| || ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 339 gtttgtacacaacttactatatgtaaataattttgatagattacaaaaacatttcttttc 280
Query: 1255 tttcctatttgttcctagcagtttttgtaaaaagatggttatataattttgcattgattt 1314
|||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 279 tttcctatttgtgccgagcagtttttgtaaaaagatggttatataattttacattgattt 220
Query: 1315 atataaattatttttattagcattgttgcaagttttttggtaagctttctcattgcttga 1374
|||||||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||
Sbjct: 219 atataaataatttttattagcactgttgcaag-tttatggtaagctttctcattgcttga 161
Query: 1375 atagcagtagtagtaggggtagacagctacgatgaatctgagcgtccttgaaaaagagcg 1434
|||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 160 ataggagtagtagtaggggtagacagcaacgatgaatctgagcgtccttgaaaaagtgcg 101
Query: 1435 gcagtacttcaggtcggaaagttttcttgtttatagaaagcacaagtccggtcgtatgtg 1494
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 acagtacttcaggtcggaaagttttcttgtttatagaaagcacaagtccggtcgtatgtg 41
Query: 1495 gaatactgctgtcacatctgaataggagttgc 1526
||||| ||||||||||||||||||||||||
Sbjct: 40 gaata---ctgtcacatctgaataggagttgc 12
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 220,323
Number of extensions: 4909
Number of successful extensions: 4909
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4906
Number of HSP's successfully gapped: 2
Length of query: 1543
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1526
Effective length of database: 8,119,229
Effective search space: 12389943454
Effective search space used: 12389943454
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)