BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16816 (UTR included)
(1127 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 163 7e-40
BF01049A2D11 86 1e-16
BF01012A2C11 70 8e-12
>BF14_729_C3
Length = 2041
Score = 163 bits (82), Expect = 7e-40
Identities = 157/182 (86%)
Strand = Plus / Plus
Query: 459 aaaaataggcgtgcgttgaagtcagcagtgtgtgaaaacaccatggataaaccaggccat 518
||||| ||||| |||| ||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 1230 aaaaacaggcgcgcgtcgaagtcagcagtgtgtgaacacacaatggacaaaccaggccac 1289
Query: 519 tacattcggttcgacaaaccacagatccttgctcgtgacgataggtacataccgagattg 578
|||||||| || || ||||| || ||||| ||||| || || | ||| |||||||||||
Sbjct: 1290 tacattcgttttgataaacctcaaatcctcgctcgggaagacaagtatataccgagatta 1349
Query: 579 atccacgaggctatcgaaattaaaaaagatcccaatttcaatacagaagatgactggaat 638
|| | ||||||||| |||||||||||| ||||||||||||||| |||||||| |||||||
Sbjct: 1350 attcgcgaggctattgaaattaaaaaacatcccaatttcaatagagaagatggctggaat 1409
Query: 639 ct 640
||
Sbjct: 1410 ct 1411
>BF01049A2D11
Length = 776
Score = 85.7 bits (43), Expect = 1e-16
Identities = 70/79 (88%)
Strand = Plus / Plus
Query: 476 gaagtcagcagtgtgtgaaaacaccatggataaaccaggccattacattcggttcgacaa 535
|||||||||||| |||||| |||| ||||| ||||||||||| ||||||||||| || ||
Sbjct: 698 gaagtcagcagtatgtgaacacacaatggacaaaccaggccactacattcggtttgataa 757
Query: 536 accacagatccttgctcgt 554
|||||| ||||| ||||||
Sbjct: 758 accacaaatcctcgctcgt 776
>BF01012A2C11
Length = 780
Score = 69.9 bits (35), Expect = 8e-12
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 382 aaaactaaattctcccggcgtttcggtttctttgcagcaaccgtgaacacg 432
|||||||||| |||||| |||||||||| ||||||||||||||||| ||||
Sbjct: 243 aaaactaaatgctcccgacgtttcggttactttgcagcaaccgtgatcacg 293
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 184,430
Number of extensions: 4814
Number of successful extensions: 4814
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 4814
Number of HSP's successfully gapped: 4
Length of query: 1127
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1110
Effective length of database: 8,119,229
Effective search space: 9012344190
Effective search space used: 9012344190
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)