BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16817 (UTR included)
(1603 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020B2E06 1340 0.0
>BF01020B2E06
Length = 712
Score = 1340 bits (676), Expect = 0.0
Identities = 703/712 (98%)
Strand = Plus / Plus
Query: 391 tttatgttttgacttttaacagttcactcctataaaagagcagcactatattaaacagct 450
||||||||||||||||| |||||||||||| |||||| | ||||||||||||||||||||
Sbjct: 1 tttatgttttgacttttcacagttcactccaataaaacaacagcactatattaaacagct 60
Query: 451 gccgaaaataaaattacattttgtttattactggccaatctaccgtgtaaatggctgacg 510
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 gccgaaaataaaattacattttgtttagtactggccaatctaccgtgtaaatggctgacg 120
Query: 511 aggacgttattcggaggcgtctactgatagatggggatggaaccggcgatgacagacggc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aggacgttattcggaggcgtctactgatagatggggatggaaccggcgatgacagacggc 180
Query: 571 ttaatgttttacttaaaactttaataaagtggtcaaatagcactgatgaaaaaccggaag 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttaatgttttacttaaaactttaataaagtggtcaaatagcactgatgaaaaaccggaag 240
Query: 631 agagtaaagcaacacacgacagaatgcttgcacagcttgcacaatgtgaatttgcagtta 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agagtaaagcaacacacgacagaatgcttgcacagcttgcacaatgtgaatttgcagtta 300
Query: 691 caaaatcacagctaggctcagagatgatggctgcggaattaaagagctatgaagcactat 750
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaaatcacagctaggatcagagatgatggctgcggaattaaagagctatgaagcactat 360
Query: 751 caaaaatacttgaaaatggcatagaagttgctaaaggtaatatagaaaagagcaaatccg 810
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 caaaaatacttgaaaatggcatagaagttgctaaaggtaatatagaaaaaagcaaatccg 420
Query: 811 atttgacacaagcaaaaacagttagaaagaatcgcattgaatatgatgtcctcgcaaaag 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttgacacaagcaaaaacagttagaaagaatcgcattgaatatgatgtcctcgcaaaag 480
Query: 871 ttatcagcgaacagcccgatagaaaggaaactttggaacgtctaagtacattaaaaatgg 930
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 481 ttatcagcgaacagcccgatagaaaggaaactttggaacgtcttagtacattaaaaatgg 540
Query: 931 agttgagcaatttagaagggacaagacaacaattggagagtcgtctgtctttgagaaaaa 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agttgagcaatttagaagggacaagacaacaattggagagtcgtctgtctttgagaaaaa 600
Query: 991 aacaattccatgtgttggtaacatcaatacatcagttacaagcactgttagatgagaatg 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aacaattccatgtgttggtaacatcaatacatcagttacaagcactgttagatgagaatg 660
Query: 1051 atgatatagaaatgacatctgatgatgttgaaatgaaggaagcttctattta 1102
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 661 atgatatagaaatgacatctgatgatattgaaatgaaggaagcttctattta 712
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 329,302
Number of extensions: 8310
Number of successful extensions: 8310
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8310
Number of HSP's successfully gapped: 1
Length of query: 1603
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1586
Effective length of database: 8,119,229
Effective search space: 12877097194
Effective search space used: 12877097194
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)