BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16825 (UTR included)
(1014 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026A1D06 827 0.0
>BF01026A1D06
Length = 804
Score = 827 bits (417), Expect = 0.0
Identities = 436/443 (98%)
Strand = Plus / Plus
Query: 305 aaaatggtggttaattcttatagcttgtatactagatgtgcaggctaattggctgctagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aaaatggtggttaattcttatagcttgtatactagatgtgcaggctaattggctgctagt 421
Query: 365 tctctcacaaagattcacctcggtgttaagctgacagctgttagcatgtagcggagtagg 424
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tctctcacaaagattcacctcagtgttaagctgacagctgttagcatgtagcggagtagg 481
Query: 425 agcagccttagttggaggtgcatggagaggtcaacggttaggggtcgctcatgttgctgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 agcagccttagttggaggtgcatggagaggtcaacggttaggggtcgctcatgttgctgg 541
Query: 485 ggcaacattgggcttgatggcagttgtttgtgtggtttgggcggacgtggaaggagctcc 544
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 542 ggcaacattgggcttgatggcagttgtttgtgtggtttgggcagacgtagaaggagctcc 601
Query: 545 caccgatggtaaaaaccaattagtgggtgatatgctttgcttagccggatcactcctcta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 caccgatggtaaaaaccaattagtgggtgatatgctttgcttagccggatcactcctcta 661
Query: 605 tgctctagtgactgtgctccaagaaataatgctcaaaacacattcatgtgcggaatattt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgctctagtgactgtgctccaagaaataatgctcaaaacacattcatgtgcggaatattt 721
Query: 665 agcattgctcggtttcattgggactctgttgtcaagttcccagacatttttcttagagtt 724
||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||
Sbjct: 722 agcattgctcggtttcattgggagtctgttgtcaagttctcagacatttttcttnnagtt 781
Query: 725 tagtgacctgatgacatttaact 747
|||||||||||||||||||||||
Sbjct: 782 tagtgacctgatgacatttaact 804
Score = 367 bits (185), Expect = e-101
Identities = 191/193 (98%)
Strand = Plus / Plus
Query: 38 ggaaagtgtggcgcggtattatattaggtcaagtgctatctcttctgttgagtggaaaat 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 ggaaagtgtggcgcggtattatattaggtcaagtgctatctcttctgttgagtggaaaat 228
Query: 98 gtattcttactacattactccagagtgctacttggcagtttcctactaatggacaactag 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gtattcttactacattactccagagtgctacttggcagtttcctactaatggacaactag 288
Query: 158 ttatcccctactttgtacttttcatattattttctccatcgctattatgcagaggcctta 217
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct: 289 ttatcccctactttgtacttttcatattattttctccatctctattatgcagaagcctta 348
Query: 218 cacagttaatgaa 230
|||||||||||||
Sbjct: 349 cacagttaatgaa 361
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 124,081
Number of extensions: 2710
Number of successful extensions: 2710
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2710
Number of HSP's successfully gapped: 2
Length of query: 1014
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 997
Effective length of database: 8,119,229
Effective search space: 8094871313
Effective search space used: 8094871313
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)