BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16827 (UTR included)
(3949 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3434_C1 1669 0.0
>BF14_3434_C1
Length = 1029
Score = 1669 bits (842), Expect = 0.0
Identities = 875/886 (98%)
Strand = Plus / Plus
Query: 2480 attgttgaagcaaataaaggataagagagaaaatgttgtcagtcaagtgcctgcattgaa 2539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 144 attgttgaagcaaataaaggataagagagaaaatgttgtcagccaagtgcctgcactgaa 203
Query: 2540 cacaaccgaaaatagagttagtattgcaaatcaaccagaggtacacaatgcaatacaaga 2599
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 cacaaccgaaaatagagttagcattgcaaatcaaccagaggtacacaatgcaatacaaga 263
Query: 2600 taaaaagtcatcagaacctccagcagtgcagaataagaatgacactgaggataagactgt 2659
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 264 taaaaagtcatcagaacctccagcagtgcagaacaagaatgacactgaggataagactat 323
Query: 2660 taaaattaaattcactaagaataatgaggaagtccaactggaaggtcattggtcccatgt 2719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 taaaattaaattcactaagaataatgaggaagtccaactggaaggtcattggtcccatgt 383
Query: 2720 aaatccaattttggcacaagttatgcagttactacaaaaagagtctaatgaaccgaaagg 2779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatccaattttggcacaagttatgcagttactacaaaaagagtctaatgaaccgaaagg 443
Query: 2780 caatgttgtaagggaggacaagaacgcctcggccaccgagagtagagagacagtggagat 2839
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caatgttgtaaaggaggacaagaacgcctcggccaccgagagtagagagacagtggagat 503
Query: 2840 tagaaaccaaacaaatacaaaaccagttgcaactaaaactaacgcaaccgagattaacat 2899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tagaaaccaaacaaatacaaaaccagttgcaactaaaactaacgcaaccgagattaacat 563
Query: 2900 caaaaataatcgagacatcagcaggcaatcgacgccggtcattccagtggatatcgaaga 2959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caaaaataatcgagacatcagcaggcaatcgacgccggtcattccagtggatatcgaaga 623
Query: 2960 tgaagtaaaggagaaagtgaaccaaatagaaaacgagatttttaaagagatagaggaaag 3019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgaagtaaaggagaaagtgaaccaaatagaaaacgagatttttaaagagatagaggaaag 683
Query: 3020 agaccaagaggaatcgtccattaaaacgaactcatcgcaaccagaggaaaatgtcacgaa 3079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agaccaagaggaatcgtccattaaaacgaactcatcgcaaccagaggaaaatgtcacgaa 743
Query: 3080 acgacgcggaagacctagaaagtcttccgctaacgccagcgcccccgtcagtccaaataa 3139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acgacgcggaagacctagaaagtcttccgctaacgccagcgcccccgtcagtccaaataa 803
Query: 3140 gaaacttaaactgaacccggaagttataaaggaagatgaacaaaaacaggataccaacga 3199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaaacttaaactgaacccggaagttataaaggaagatgaacaaaaacaggataccaacga 863
Query: 3200 aagttctaaagacagcgaaccggaaacagacacgaaggcatcggaagcgaggaaaagaag 3259
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 864 aagttctaaagacagcgaaccggaaacagacacaaaggcatcggaagcgaggaaaagaag 923
Query: 3260 atcacccaaaaaaagttcaaacgaacctgcaaaggagattaggacaagacagtccctatc 3319
||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 924 atcacccaagaaaagttcacacgaacctccaaaggagattaggacaagacagtccctatc 983
Query: 3320 aagaaagtccaaggaaattaaaagtccaaaattaaacgaatctgcg 3365
||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 984 aagaaagtccaaggaaattaaaagtccaaaattcaacgaatctgcg 1029
Score = 101 bits (51), Expect = 8e-21
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 2423 atcattttggaagctgaagtatgtggaggagaaaaaaaaggctgatgaattgactaa 2479
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 atcattttggaagctgaagtatgtggaggnnaaaaaaaaggctgatgaattgactaa 57
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 520,660
Number of extensions: 10548
Number of successful extensions: 10548
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10548
Number of HSP's successfully gapped: 2
Length of query: 3949
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3931
Effective length of database: 8,109,745
Effective search space: 31879407595
Effective search space used: 31879407595
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)