BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16829 (UTR included)
(1375 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1695_C1 84 7e-16
BF01025B1E11 70 1e-11
BF14_2430_C1 70 1e-11
BF14_1645_C1 68 4e-11
>BF14_1695_C1
Length = 1407
Score = 83.8 bits (42), Expect = 7e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1137 acactggaagaatatactgtgcacgtctttggacggatgaaggccatattttaaaaaa 1194
||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||||||
Sbjct: 1189 acactggcagaatatactgtgcacgtctttgcacggatgaatgccatattataaaaaa 1246
>BF01025B1E11
Length = 786
Score = 69.9 bits (35), Expect = 1e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 1139 actggaagaatatactgtgcacgtctttggacggatgaaggccatattttaaaaaacaa 1197
||||| |||||||| |||||||||| ||| ||||||||||||||||||| || ||||||
Sbjct: 220 actggcagaatatattgtgcacgtccttgcacggatgaaggccatatttaaacaaacaa 278
>BF14_2430_C1
Length = 830
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 1137 acactggaagaatatactgtgcacgtctttggacggatgaaggccatattt 1187
||||||| |||||||||||||||| |||||| ||| |||||||||||||||
Sbjct: 182 acactggcagaatatactgtgcacatctttgcacgtatgaaggccatattt 232
>BF14_1645_C1
Length = 793
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 1137 acactggaagaatatactgtgcacgtctttggacggatgaaggccatattttaaaaaa 1194
||||||| ||||||||||||||||||||| | |||| ||||||||||| | |||||||
Sbjct: 132 acactggcagaatatactgtgcacgtcttggcacgggtgaaggccataatataaaaaa 189
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,509
Number of extensions: 6161
Number of successful extensions: 6161
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 6161
Number of HSP's successfully gapped: 4
Length of query: 1375
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1358
Effective length of database: 8,119,229
Effective search space: 11025912982
Effective search space used: 11025912982
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)