BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16831 (UTR included)
(1915 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01039B1D04 1497 0.0
BF14_2267_C1 1181 0.0
>BF01039B1D04
Length = 764
Score = 1497 bits (755), Expect = 0.0
Identities = 761/764 (99%)
Strand = Plus / Plus
Query: 260 atacaaacatcgagatcttacttcacgggacgtgactaacgtaatacaagtttatcgtgg 319
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 atacaaacatcgagatcttacttcacgggannngactaacgtaatacaagtttatcgtgg 60
Query: 320 tttgaattttcgagtcgagggctttgtattcaacaatggagtaagaaaagaccttttgaa 379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tttgaattttcgagtcgagggctttgtattcaacaatggagtaagaaaagaccttttgaa 120
Query: 380 tttagagggaacaatacctgttaattacaaaggtgcttattacaatattcctatttgtat 439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttagagggaacaatacctgttaattacaaaggtgcttattacaatattcctatttgtat 180
Query: 440 ttggctaatggacacgcatccgcaaaatgcacctttgtgttttgtaaaaccgacacctga 499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggctaatggacacgcatccgcaaaatgcacctttgtgttttgtaaaaccgacacctga 240
Query: 500 tatgtcaataaaagtatcaaaatatgttgataataacggaaaaatttatttaccgtatct 559
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatgtcaataaaagtatcaaaatatgttgataataacggaaaaatttatttaccgtatct 300
Query: 560 acacgaatggaaagctaatgtttccactttacagcgactcgttcagcaaatgatcattgc 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acacgaatggaaagctaatgtttccactttacagcgactcgttcagcaaatgatcattgc 360
Query: 620 ttttggagaattaccgcccgtctattcgaaaccacggaacgaagtgcgtccaccctatcc 679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttttggagaattaccgcccgtctattcgaaaccacggaacgaagtgcgtccaccctatcc 420
Query: 680 tatgaactcctttatgccgcagccggcaggttatccatatcccacagtcagcccccctca 739
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatgaactcctttatgccgcagccggcaggttatccatatcccacagtcagcccccctca 480
Query: 740 gcagggatatccttcggtgactccatatccgacaacttcccaactgccatatcccagttt 799
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcagggatatccttcggtgactccatatccgacaacttcccaactgccatatcccagttt 540
Query: 800 tggttcaccatatcctggcacagtcaatactaacggttcaccatatcctggaccaaatcc 859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tggttcaccatatcctggcacagtcaatactaacggttcaccatatcctggaccaaatcc 600
Query: 860 tccatatccaccagtgactgtcaatccagtaacagatgttgctggtggcactatcacaga 919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tccatatccaccagtgactgtcaatccagtaacagatgttgctggtggcactatcacaga 660
Query: 920 agaacatatcaaggcgtcattgctctctgcagtagaagataaactaagacgcagactcaa 979
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 agaacatatcaaggcgtcattgctctctgcagtagaagataaactaagacgcagactcaa 720
Query: 980 agaacagtctcaacaatcacaggctgaactcgaaacattacgtc 1023
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 agaacagtctcaacaatcacaggctgaactcgaaacattacgtc 764
>BF14_2267_C1
Length = 794
Score = 1181 bits (596), Expect = 0.0
Identities = 617/624 (98%)
Strand = Plus / Plus
Query: 1292 cttacgtaaagaagtgatcgatttggatacatttttgaaacaagttcgtactcttgctag 1351
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cttacgtaaagaagtgatagatttggatacatttttgaaacaagttcgtactcttgctag 72
Query: 1352 acgacagttcaccttacgtgcactaatgcataaatgtaggcaaaaggcccagcttgcatg 1411
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 acgacagttcaccttgcgtgcactaatgcataaatgtaggcaaaaggcccagcttgcatg 132
Query: 1412 ttaataaaaatgcttgtgatggagtatgattcataaagtaactttgtttatgaaacttgc 1471
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 133 ttaataaaaatgcttgtgatggagtatgattcataaaataactttgtttatgaaacttgc 192
Query: 1472 tatatttaatacaatctgtaggcaaatagataattgaaatgaaattatgtgttgtgccac 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tatatttaatacaatctgtaggcaaatagataattgaaatgaaattatgtgttgtgccac 252
Query: 1532 atctttcatattaagattatggatgtaatactacagcagtatacacatttaaaagaaatg 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atctttcatattaagattatggatgtaatactacagcagtatacacatttaaaagaaatg 312
Query: 1592 actaaaaagttgtgcaataggtaacaatgataatgaaaattcattcatatttgttttacc 1651
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 313 actaaaaagttgtgcaataggtaacaatgataatgaaaattcattaatatttgttttacc 372
Query: 1652 atttaatttcatattcaaacttaatgtgaaactatgttttaaaacagtatgtactttcat 1711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atttaatttcatattcaaacttaatgtgaaactatgttttaaaacagtatgtactttcat 432
Query: 1712 tttaattattatatggaacattcaagaaataattattaagcttatataatatgtagatta 1771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttaattattatatggaacattcaagaaataattattaagcttatataatatgtagatta 492
Query: 1772 cttattttattgtcagctatatagtgtatcaggtttactcaaaattaatattaatatgtt 1831
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cttattttattgtcagctatagagtgtatcaggtttactcaaaattaatattaatatgtt 552
Query: 1832 aaatttttctagtgagatacatatgaatctgattttttttaatgaaattattgctaactt 1891
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 553 aaatttttctagtgagatacacatgaatctgatttttttaaatgaaattattgctaactt 612
Query: 1892 ttttttatgttaggtaactgtgct 1915
||||||||||||||||||||||||
Sbjct: 613 ttttttatgttaggtaactgtgct 636
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 250,105
Number of extensions: 4759
Number of successful extensions: 4759
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4756
Number of HSP's successfully gapped: 2
Length of query: 1915
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1898
Effective length of database: 8,119,229
Effective search space: 15410296642
Effective search space used: 15410296642
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)