BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16834 (UTR included)
(1495 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2239_C1 1172 0.0
>BF14_2239_C1
Length = 649
Score = 1172 bits (591), Expect = 0.0
Identities = 608/614 (99%)
Strand = Plus / Plus
Query: 391 cgagctgtcgtcgttcgtaggacgtgaactttgtagttcgtcttaaatccaaagtaatcg 450
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 31 cgagctgncgtcgttcgtaggacgtgaactttgtagttcgtcttaaatccaaactaatcg 90
Query: 451 ctttggatatagattttttgtaatattaaattacattataatataacaaaatgccgccta 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 ctttggatatagattttttgtaatattaaattacattataatataacaaaatgccgccta 150
Query: 511 agtttgatcctaacgaaattaaaatcgtttgcttgagatgtgttggtggagaagtgggtg 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 agtttgatcctaacgaaattaaaatcgtttgcttgagatgtgttggtggagaagtgggtg 210
Query: 571 ctacatcatctttggctcctaaaattggtccacttggtctgtcccctaaaaaggttggtg 630
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ctacatcatctttggctcctaaaattggtccacttggtctgtcccctaaaaaggttggtg 270
Query: 631 atgacatcgctaaggctactagcgagtggaagggtctgaagatcacagtgcagttgattg 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 atgacatcgctaaggctactagcgagtggaagggtctgaagatcacagtgcagttgattg 330
Query: 691 tacagaacagacaggctcagatatctgtagtgccgtctgccgctgccctcatcattagag 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tacagaacagacaggctcagatatctgtagtgccgtctgccgctgccctcatcattagag 390
Query: 751 ccttgaaggaacctccgcgtgaccgcaagaagcaaaagaacatcaaacacagtggcaaca 810
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ccttgaaggaacctccccgtgaccgcaagaagcaaaagaacatcaaacacagtggcaaca 450
Query: 811 tcaccctggaggatgtcattagcattgctaagaccatgagaccacgatctatggcgaggt 870
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 451 tcaccctggaggatgtcattagcattgctaagaccatgagaccacgatctatggcaagat 510
Query: 871 atctgtctggaacagtcaaagaaatccttggaactgcccaatcagttggctgcaccgtag 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 atctgtctggaacagtcaaagaaatccttggaactgcccaatcagttggctgcaccgtag 570
Query: 931 aaggaagaccccctcacgacttgattgttgatatcaatgagggtacacttaccattgatg 990
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 aaggaagaccccctcacgaattgattgttgatatcaatgagggtacacttaccattgatg 630
Query: 991 aataaacatcaatt 1004
||||||||||||||
Sbjct: 631 aataaacatcaatt 644
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,946
Number of extensions: 8247
Number of successful extensions: 8247
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8247
Number of HSP's successfully gapped: 1
Length of query: 1495
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1478
Effective length of database: 8,119,229
Effective search space: 12000220462
Effective search space used: 12000220462
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)