BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN16862 (UTR included)
(1861 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3494_C1 1536 0.0
>BF14_3494_C1
Length = 789
Score = 1536 bits (775), Expect = 0.0
Identities = 785/789 (99%)
Strand = Plus / Plus
Query: 447 gtatcatcgtctgttttattatcgctactctttctagttaaatttattataactatgggt 506
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gtatcatcgtctgttttattatcgttactctttctagttaaatttattataactatgggt 60
Query: 507 ttagcaactgtgatagaaaatgaagctcatttccaatctgaaatggctaatgctggaact 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttagcaactgtgatagaaaatgaagctcatttccaatctgaaatggctaatgctggaact 120
Query: 567 aagctggttgtagtagattttacagcaacctggtgtccaccgtgccagcgtattgctcca 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagctggttgtagtagattttacagcaacctggtgtccaccgtgccagcgtattgctcca 180
Query: 627 ttctttgagcagctcccagccaagttcccacgtgctgtatttcttaaggtcgacgtagat 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttctttgagcagctcccagccaagttcccacgtgctgtatttcttaaggtcgacgtagat 240
Query: 687 agatgcgccgaaacagccagtgcacagggtatcagtgcgatgcctacattcatattttac 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgcgccgaaacagccagtgcacagggtatcagtgcgatgcctacattcatattttac 300
Query: 747 agaaatcgtgcaagaattgaccggctgcagggcgccgatccttcatccttagaaaataaa 806
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agaaatcgtgcaagaattgaccggctgcagggcgccgatccttcatccttagaaaataaa 360
Query: 807 gtaagacagtactatggcactgaagacagcggtgatgatgacaattctgttgctggacat 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaagacagtactatggcactgaagacagcggtgatgatgacaattctgttgctggacat 420
Query: 867 atggatttaaatacattcattgtaaagaatgaatgtgaatgtctgaatgaagctgatgat 926
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atggatttaaatacattcattgtaaagaatgaatgtgaatgtctgaatgaagctgatgat 480
Query: 927 catccactgtctcatgcgctcacaagtggtgatgggcacttggctagtgactgtgatgaa 986
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 481 catccactgtctcatgcgctcacaagtgctgatgggcacttggctagtgactgtgatgaa 540
Query: 987 caactcatcataaatatttcattcaatcagctagttaaaattcattcaatcaaaatgaaa 1046
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caactcatcataaatatttcattcaatcagctagttaaaattcattcaatcaaaatgaaa 600
Query: 1047 gcaccaagtgacaagggtccaaaatctgttaaggtgtttattaatcagccgaggacactt 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcaccaagtgacaagggtccaaaatctgttaaggtgtttattaatcagccgaggacactt 660
Query: 1107 gattttgatcaagctgcaggaaatgcatcgattcaggatttggagatatcttcgagtgat 1166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gattttgatcaagctgcaggaaatgcatcgattcaggatttggagatatcttcgagtgat 720
Query: 1167 ttagaaggtaatcccgtaccattgaagtttgtcaagttccagagcgttcagaacattcaa 1226
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 721 ttagaaggtaatcccgtaccattgaagtttgtcaagttccagnncgttcagaacattcaa 780
Query: 1227 ctatttatc 1235
|||||||||
Sbjct: 781 ctatttatc 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 247,868
Number of extensions: 5273
Number of successful extensions: 5273
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5271
Number of HSP's successfully gapped: 1
Length of query: 1861
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1844
Effective length of database: 8,119,229
Effective search space: 14971858276
Effective search space used: 14971858276
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)